Modelling growth and form of the scleractinian coral Pocillopora verrucosa and the influence of hydrodynamics.

The growth of scleractinian corals is strongly influenced by the effect of water motion. Corals are known to have a high level of phenotypic variation and exhibit a diverse range of growth forms, which often contain a high level of geometric complexity. Due to their complex shape, simulation models...

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Main Authors: Nol Chindapol, Jaap A Kaandorp, Carolina Cronemberger, Tali Mass, Amatzia Genin
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2013-01-01
Series:PLoS Computational Biology
Online Access:http://europepmc.org/articles/PMC3542083?pdf=render
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spelling doaj-feacf9a9bf5c4a5b910c1093bc55c4ce2020-11-25T01:46:02ZengPublic Library of Science (PLoS)PLoS Computational Biology1553-734X1553-73582013-01-0191e100284910.1371/journal.pcbi.1002849Modelling growth and form of the scleractinian coral Pocillopora verrucosa and the influence of hydrodynamics.Nol ChindapolJaap A KaandorpCarolina CronembergerTali MassAmatzia GeninThe growth of scleractinian corals is strongly influenced by the effect of water motion. Corals are known to have a high level of phenotypic variation and exhibit a diverse range of growth forms, which often contain a high level of geometric complexity. Due to their complex shape, simulation models represent an important option to complement experimental studies of growth and flow. In this work, we analyzed the impact of flow on coral's morphology by an accretive growth model coupled with advection-diffusion equations. We performed simulations under no-flow and uni-directional flow setup with the Reynolds number constant. The relevant importance of diffusion to advection was investigated by varying the diffusion coefficient, rather than the flow speed in Péclet number. The flow and transport equations were coupled and solved using COMSOL Multiphysics. We then compared the simulated morphologies with a series of Computed Tomography (CT) scans of scleractinian corals Pocillopora verrucosa exposed to various flow conditions in the in situ controlled flume setup. As a result, we found a similar trend associated with the increasing Péclet for both simulated forms and in situ corals; that is uni-directional current tends to facilitate asymmetrical growth response resulting in colonies with branches predominantly developed in the upstream direction. A closer look at the morphological traits yielded an interesting property about colony symmetry and plasticity induced by uni-directional flow. Both simulated and in situ corals exhibit a tendency where the degree of symmetry decreases and compactification increases in conjunction with the augmented Péclet thus indicates the significant importance of hydrodynamics.http://europepmc.org/articles/PMC3542083?pdf=render
collection DOAJ
language English
format Article
sources DOAJ
author Nol Chindapol
Jaap A Kaandorp
Carolina Cronemberger
Tali Mass
Amatzia Genin
spellingShingle Nol Chindapol
Jaap A Kaandorp
Carolina Cronemberger
Tali Mass
Amatzia Genin
Modelling growth and form of the scleractinian coral Pocillopora verrucosa and the influence of hydrodynamics.
PLoS Computational Biology
author_facet Nol Chindapol
Jaap A Kaandorp
Carolina Cronemberger
Tali Mass
Amatzia Genin
author_sort Nol Chindapol
title Modelling growth and form of the scleractinian coral Pocillopora verrucosa and the influence of hydrodynamics.
title_short Modelling growth and form of the scleractinian coral Pocillopora verrucosa and the influence of hydrodynamics.
title_full Modelling growth and form of the scleractinian coral Pocillopora verrucosa and the influence of hydrodynamics.
title_fullStr Modelling growth and form of the scleractinian coral Pocillopora verrucosa and the influence of hydrodynamics.
title_full_unstemmed Modelling growth and form of the scleractinian coral Pocillopora verrucosa and the influence of hydrodynamics.
title_sort modelling growth and form of the scleractinian coral pocillopora verrucosa and the influence of hydrodynamics.
publisher Public Library of Science (PLoS)
series PLoS Computational Biology
issn 1553-734X
1553-7358
publishDate 2013-01-01
description The growth of scleractinian corals is strongly influenced by the effect of water motion. Corals are known to have a high level of phenotypic variation and exhibit a diverse range of growth forms, which often contain a high level of geometric complexity. Due to their complex shape, simulation models represent an important option to complement experimental studies of growth and flow. In this work, we analyzed the impact of flow on coral's morphology by an accretive growth model coupled with advection-diffusion equations. We performed simulations under no-flow and uni-directional flow setup with the Reynolds number constant. The relevant importance of diffusion to advection was investigated by varying the diffusion coefficient, rather than the flow speed in Péclet number. The flow and transport equations were coupled and solved using COMSOL Multiphysics. We then compared the simulated morphologies with a series of Computed Tomography (CT) scans of scleractinian corals Pocillopora verrucosa exposed to various flow conditions in the in situ controlled flume setup. As a result, we found a similar trend associated with the increasing Péclet for both simulated forms and in situ corals; that is uni-directional current tends to facilitate asymmetrical growth response resulting in colonies with branches predominantly developed in the upstream direction. A closer look at the morphological traits yielded an interesting property about colony symmetry and plasticity induced by uni-directional flow. Both simulated and in situ corals exhibit a tendency where the degree of symmetry decreases and compactification increases in conjunction with the augmented Péclet thus indicates the significant importance of hydrodynamics.
url http://europepmc.org/articles/PMC3542083?pdf=render
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