Proposed definition of crystal substructure and substructural similarity

There is a clear need for a practical and mathematically rigorous description of local structure in inorganic compounds so that structures and chemistries can be easily compared across large data sets. Here a method for decomposing crystal structures into substructures is given, and a similarity fun...

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Bibliographic Details
Main Authors: Yang, Lusann (Contributor), Ceder, Gerbrand (Contributor), Dacek, Stephen Thomas (Contributor)
Other Authors: Massachusetts Institute of Technology. Department of Materials Science and Engineering (Contributor)
Format: Article
Language:English
Published: American Physical Society, 2014-08-11T17:53:13Z.
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Summary:There is a clear need for a practical and mathematically rigorous description of local structure in inorganic compounds so that structures and chemistries can be easily compared across large data sets. Here a method for decomposing crystal structures into substructures is given, and a similarity function between those substructures is defined. The similarity function is based on both geometric and chemical similarity. This construction allows for large-scale data mining of substructural properties, and the analysis of substructures and void spaces within crystal structures. The method is validated via the prediction of Li-ion intercalation sites for the oxides. Tested on databases of known Li-ion-containing oxides, the method reproduces all Li-ion sites in an oxide with a maximum of 4 incorrect guesses 80% of the time.
National Science Foundation (U.S.) (SI2-SSI Collaborative Research program Award OCI-1147503)
United States. Dept. of Energy. Office of Basic Energy Sciences (Grant EDCBEE)