Automated Alignment of RNA 3D Structures

Automated Alignment of RNA 3D Structures

Bibliographic Details
Main Author:	Rahrig, Ryan Robert
Language:	English
Published:	Bowling Green State University / OhioLINK 2010
Subjects:	Bioinformatics Mathematics Molecular Biology RNA Alignment
Online Access:	http://rave.ohiolink.edu/etdc/view?acc_num=bgsu1276873588

Similar Items

Aligning multiple sequences adaptively
by: Ye, Yongtao, et al.
Published: (2014)

Fast and accurate structure probability estimation for simultaneous alignment and folding of RNAs with Markov chains
by: Milad Miladi, et al.
Published: (2020-11-01)

Improving the quality of multiple sequence alignment
by: Lu, Yue
Published: (2010)

Computational Processing of Omics Data: Implications for Analysis
by: Benjamin, Ashlee Marie
Published: (2013)

Dynamic Programming Used to Align Protein Structures with a Spectrum Is Robust
by: Allen Holder, et al.
Published: (2013-11-01)

ADEPT: a domain independent sequence alignment strategy for gpu architectures
by: Muaaz G. Awan, et al.
Published: (2020-09-01)

User Interface and Modified Testbench to Support Comprehensive Analysis of Protein Structural Alignment Tools
by: Kamepalli, Phanindra
Published: (2011)

A Benchmark Data Set and Comparative Study for Protein Structural Alignment Tools
by: Mittal, Dipti
Published: (2008)

Bioinformatic challenges of big data in non-coding RNA research
by: Christina eLiu, et al.
Published: (2012-09-01)

GPU accelerated sequence alignment /Zhao Kaiyong.
by: Zhao, Kaiyong
Published: (2016)

Conserved signals of non coding RNA across 73 genes associated with Autistic Spectrum Disorders
by: Rais, Theodor Bernard
Published: (2009)

GADP-align: A genetic algorithm and dynamic programming-based method for structural alignment of proteins
by: Soraya Mirzaei, et al.
Published: (2021-07-01)

Transcriptional States and microRNA Regulation of Adult Neural Stem Cells
by: DeLeo, Annina
Published: (2015)

AMAS: a fast tool for alignment manipulation and computing of summary statistics
by: Marek L. Borowiec
Published: (2016-01-01)

Inverse Parametric Alignment for Accurate Biological Sequence Comparison
by: Kim, Eagu
Published: (2008)

Loop Prediction and Homology Modeling with High Resolution
by: Xu, Tianchuan
Published: (2020)

A computational framework of host-based drug repositioning for broad-spectrum antivirals against RNA viruses
by: Zexu Li, et al.
Published: (2021-03-01)

RNA Secondary Structures: from Biophysics to Bioinformatics
by: Baez, William David
Published: (2018)

The evolution of protein folds from the perspective of structure motifs
by: Dybas, Joseph M.
Published: (2015)

Measuring deviation from a deeply conserved consensus in protein multiple sequence alignments
by: Mokin, Sergey
Published: (2008)

Nucleosome Fragility and Resistance: An Additional Dimension of Chromatin Structure Information in Eukaryotic Genomes

RNA Homology Searches Using Pair Seeding
by: Darbha, Sriram
Published: (2006)

RNA Homology Searches Using Pair Seeding
by: Darbha, Sriram
Published: (2006)

Evolution of Telomerase RNA
Published: (2019)

A new Mycobacterium leprae dihydropteroate synthase variant (V39I) from Papua, Indonesia
by: Yustinus Maladan, et al.
Published: (2019-03-01)

Verification of miRNAs in ginseng decoction by high-throughput sequencing and quantitative real-time PCR
by: Yingfang Wang, et al.
Published: (2019-04-01)

Improvements in the Accuracy of Pairwise Genomic Alignment
by: Hudek, Alexander Karl
Published: (2010)

Improvements in the Accuracy of Pairwise Genomic Alignment
by: Hudek, Alexander Karl
Published: (2010)

Characterization and Analysis of a Novel Platform for Profiling the Antibody Response
Published: (2011)

RNApolis: Computational Platform for RNA Structure Analysis
by: Szachniuk Marta
Published: (2019-06-01)

Dinoflagellate genomic organization and phylogenetic marker discovery utilizing deep sequencing data
by: Mendez, Gregory Scott
Published: (2016)

Protocol for executing and benchmarking eight computational doublet-detection methods in single-cell RNA sequencing data analysis
by: Nan Miles Xi, et al.
Published: (2021-09-01)

Structure-Preserving Rearrangements| Algorithms for Structural Comparison and Protein Analysis
by: Bliven, Spencer Edward
Published: (2015)

Identification of microRNA Biogenesis Regulators and Activity Modulators
by: Chung, Wei-Jen
Published: (2014)

Assessing alignment-based taxonomic classification of ancient microbial DNA
by: Raphael Eisenhofer, et al.
Published: (2019-03-01)

The role of RNA-editing in viral mediated pathogenesis
by: Frederick , Madeline Rose
Published: (2018)

Automated Prediction of Human Disease Genes
by: Blom, Martin
Published: (2013)

Ontology Slice Generation and Alignment for Enhanced Life Science Literature Search
by: Bergman Laurila, Jonas
Published: (2009)

Bioinformatics resource manager v2.3: an integrated software environment for systems biology with microRNA and cross-species analysis tools
by: Tilton Susan C, et al.
Published: (2012-11-01)

Improved Placement of Multi-mapping Small RNAs
by: Nathan R. Johnson, et al.
Published: (2016-07-01)

Cannot write session to /tmp/vufind_sessions/sess_s3sklcn0fk9srj72ac0h297krh