Analysis of the differences in protein expression associated with thyroid orbitopathy by proteomic approach

碩士 === 高雄醫學大學 === 醫學研究所 === 97 === Purpose: Application of proteomics to understand the qualitative differences in protein expression of extraocular muscle tissues and orbital adipose tissues associated with thyroid orbitopathy (TO) Material and method: We obtained extraocular muscle tissues or orbi...

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Main Authors: Kai-Chun Cheng, 鄭凱駿
Other Authors: Cheng-Hsien Chang
Format: Others
Language:zh-TW
Published: 2009
Online Access:http://ndltd.ncl.edu.tw/handle/hnz84p
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spelling ndltd-TW-097KMC055340342019-05-15T20:06:41Z http://ndltd.ncl.edu.tw/handle/hnz84p Analysis of the differences in protein expression associated with thyroid orbitopathy by proteomic approach 利用蛋白質體學方法分析甲狀腺眼病變之眼窩蛋白質變化 Kai-Chun Cheng 鄭凱駿 碩士 高雄醫學大學 醫學研究所 97 Purpose: Application of proteomics to understand the qualitative differences in protein expression of extraocular muscle tissues and orbital adipose tissues associated with thyroid orbitopathy (TO) Material and method: We obtained extraocular muscle tissues or orbital fat tissues from patients with thyroid orbitopathy during strabismus surgery or orbital decompression as the study group. We also acquired extraocular muscle tissues from patients who received strabismus surgery or took orbital fat tissues from patients who accepted eyelid plasty as the control group. In this study, we used two proteomic methods to comprehensively examine the extraocular muscle and orbital fat proteomes of TO patients and non-TO controls. These methods included two-dimensional gel electrophoresis(2-DE) combined with electrospray ionization-quadrupole-time-of-flight mass spectrometry (ESI- QUAD-TOF mass spectrometry) and liquid chromatography tandem mass spectrometry (LC-MS/MS). Result: Among all protein spots separated by 2DE, we found the eight spots that were significantly different between the study and the control group. The eight spots were analyzed by ESI- QUAD-TOF mass spectrometry. Proteins from four of the eight spots were identified successfully, which had relatively higher concentration in the study group. These are (1)chain A, human serum albumin in a complex with myristic acid and tri- iodobenzoic acid (2)chain B, structure of hemoglobin in the deoxy quaternary state with ligand bound at the alpha haems (3)beta globin chain variant and (4) chain A, structure of hemoglobin in the deoxy quaternary state with ligand bound at the alpha haems. To increase protein identification, we employed a complementary analytical platform, LC-MS/MS. By this instrument, 7 proteins were identified only in the orbital fat tissues of the study group, including (1)chain A, human serum albumin in a complex with myristic acid and tri-iodobenzoic acid (2)chain B, human hemoglobin D Los Angeles: crystal structure (3)hemoglobin beta (4)chain B, structure of hemoglobin in the deoxy quaternary state with ligand bound at the alpha haems (5)beta globin chain variant (6)chain A, cyanomet Rhb1.1 (recombinant hemoglobin) and (7) unnamed protein product. One protein─vimentin─ was identified in the orbital fat samples of the non-TO controls and this protein had significantly expressed in the control group. There were 10 proteins identified only in the extraocular muscle tissues of the study group, including (1)chain A, human serum albumin in a complex with myristic acid and tri-iodobenzoic acid (2)chain B, human hemoglobin D Los Angeles: crystal structure (3)beta-globin (4)hemoglobin beta (5)chain A, structure of hemoglobin in the deoxy quaternary state with ligand bound at the alpha haems (6)chain B, structure of hemoglobin in the deoxy quaternary state with ligand bound at the alpha haems (7)beta globin chain variant (8)chain B, crystal structure of human hemoglobin E at 1.73 A resolution (9)unnamed protein product (10) beta globin chain. Conclusion: The results obtained with this proteomic analysis let us know which protein is up-regulated or down-regulated in thyroid orbitopathy. This will be of use in understanding the pathophysiology of thyroid orbitopathy as well as in finding candidates as new diagnostic biomarkers of thyroid orbitopathy. Cheng-Hsien Chang 張丞賢 2009 學位論文 ; thesis 59 zh-TW
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description 碩士 === 高雄醫學大學 === 醫學研究所 === 97 === Purpose: Application of proteomics to understand the qualitative differences in protein expression of extraocular muscle tissues and orbital adipose tissues associated with thyroid orbitopathy (TO) Material and method: We obtained extraocular muscle tissues or orbital fat tissues from patients with thyroid orbitopathy during strabismus surgery or orbital decompression as the study group. We also acquired extraocular muscle tissues from patients who received strabismus surgery or took orbital fat tissues from patients who accepted eyelid plasty as the control group. In this study, we used two proteomic methods to comprehensively examine the extraocular muscle and orbital fat proteomes of TO patients and non-TO controls. These methods included two-dimensional gel electrophoresis(2-DE) combined with electrospray ionization-quadrupole-time-of-flight mass spectrometry (ESI- QUAD-TOF mass spectrometry) and liquid chromatography tandem mass spectrometry (LC-MS/MS). Result: Among all protein spots separated by 2DE, we found the eight spots that were significantly different between the study and the control group. The eight spots were analyzed by ESI- QUAD-TOF mass spectrometry. Proteins from four of the eight spots were identified successfully, which had relatively higher concentration in the study group. These are (1)chain A, human serum albumin in a complex with myristic acid and tri- iodobenzoic acid (2)chain B, structure of hemoglobin in the deoxy quaternary state with ligand bound at the alpha haems (3)beta globin chain variant and (4) chain A, structure of hemoglobin in the deoxy quaternary state with ligand bound at the alpha haems. To increase protein identification, we employed a complementary analytical platform, LC-MS/MS. By this instrument, 7 proteins were identified only in the orbital fat tissues of the study group, including (1)chain A, human serum albumin in a complex with myristic acid and tri-iodobenzoic acid (2)chain B, human hemoglobin D Los Angeles: crystal structure (3)hemoglobin beta (4)chain B, structure of hemoglobin in the deoxy quaternary state with ligand bound at the alpha haems (5)beta globin chain variant (6)chain A, cyanomet Rhb1.1 (recombinant hemoglobin) and (7) unnamed protein product. One protein─vimentin─ was identified in the orbital fat samples of the non-TO controls and this protein had significantly expressed in the control group. There were 10 proteins identified only in the extraocular muscle tissues of the study group, including (1)chain A, human serum albumin in a complex with myristic acid and tri-iodobenzoic acid (2)chain B, human hemoglobin D Los Angeles: crystal structure (3)beta-globin (4)hemoglobin beta (5)chain A, structure of hemoglobin in the deoxy quaternary state with ligand bound at the alpha haems (6)chain B, structure of hemoglobin in the deoxy quaternary state with ligand bound at the alpha haems (7)beta globin chain variant (8)chain B, crystal structure of human hemoglobin E at 1.73 A resolution (9)unnamed protein product (10) beta globin chain. Conclusion: The results obtained with this proteomic analysis let us know which protein is up-regulated or down-regulated in thyroid orbitopathy. This will be of use in understanding the pathophysiology of thyroid orbitopathy as well as in finding candidates as new diagnostic biomarkers of thyroid orbitopathy.
author2 Cheng-Hsien Chang
author_facet Cheng-Hsien Chang
Kai-Chun Cheng
鄭凱駿
author Kai-Chun Cheng
鄭凱駿
spellingShingle Kai-Chun Cheng
鄭凱駿
Analysis of the differences in protein expression associated with thyroid orbitopathy by proteomic approach
author_sort Kai-Chun Cheng
title Analysis of the differences in protein expression associated with thyroid orbitopathy by proteomic approach
title_short Analysis of the differences in protein expression associated with thyroid orbitopathy by proteomic approach
title_full Analysis of the differences in protein expression associated with thyroid orbitopathy by proteomic approach
title_fullStr Analysis of the differences in protein expression associated with thyroid orbitopathy by proteomic approach
title_full_unstemmed Analysis of the differences in protein expression associated with thyroid orbitopathy by proteomic approach
title_sort analysis of the differences in protein expression associated with thyroid orbitopathy by proteomic approach
publishDate 2009
url http://ndltd.ncl.edu.tw/handle/hnz84p
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