Different Effects of LncRNA NDRG1-OT1_v4 Fragments on Regulating NDRG1 Transcription in Breast Cancer Cells Under Hypoxia
碩士 === 國立臺灣大學 === 生理學研究所 === 106 === Hypoxia is a crucial factor in aggressiveness of solid tumor by driving multiple signaling pathways. Recent researchers indicated that long non-coding RNA (lncRNA) could promote or inhibit tumor aggressiveness by regulating gene expression. Previous studies in ou...
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ndltd-TW-106NTU051160022019-05-16T00:22:54Z http://ndltd.ncl.edu.tw/handle/9n566s Different Effects of LncRNA NDRG1-OT1_v4 Fragments on Regulating NDRG1 Transcription in Breast Cancer Cells Under Hypoxia 長鏈非編碼核糖核酸NDRG1-OT1_v4不同片段在缺氧的乳癌細胞中對NDRG1轉錄調控有不同的影響 Ching-Ching Yeh 葉京青 碩士 國立臺灣大學 生理學研究所 106 Hypoxia is a crucial factor in aggressiveness of solid tumor by driving multiple signaling pathways. Recent researchers indicated that long non-coding RNA (lncRNA) could promote or inhibit tumor aggressiveness by regulating gene expression. Previous studies in our laboratory found the expression of lncRNA NDRG1-OT1_v4 significantly increased under hypoxia by next-generation sequencing (NGS). Moreover, it was discovered that the NDRG1-OT1_v4 inhibited NDRG1 at both mRNA and protein levels of NDRG1. At the protein level, NDRG1-OT1_v4 improved NDRG1 degradation via ubiquitin-mediated proteolysis pathway. However, the repressive mechanism of NDRG1 at RNA level was still unknown. In this studies, we found that NDRG1-OT1_v4 decreased the NDRG1 promoter activities when we overexpressed NDRG1-OT1_v4 under hypoxia. The fragment (150-263 nt) of NDRG1-OT1_v4 repressed NDRG1 promoter activity significantly by increasing the binding affinity of hnRNPA1. On the other hand, another fragment (264-392 nt) of NDRG1-OT1_v4 improved NDRG1 promoter activity by recruiting HIF-1 alpha. In conclusion, we found a novel mechanism that different fragments of same lncRNA could cause opposite effects on the identical target gene. Liang-Chuan Lai 賴亮全 2018 學位論文 ; thesis 40 zh-TW |
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碩士 === 國立臺灣大學 === 生理學研究所 === 106 === Hypoxia is a crucial factor in aggressiveness of solid tumor by driving multiple signaling pathways. Recent researchers indicated that long non-coding RNA (lncRNA) could promote or inhibit tumor aggressiveness by regulating gene expression. Previous studies in our laboratory found the expression of lncRNA NDRG1-OT1_v4 significantly increased under hypoxia by next-generation sequencing (NGS). Moreover, it was discovered that the NDRG1-OT1_v4 inhibited NDRG1 at both mRNA and protein levels of NDRG1. At the protein level, NDRG1-OT1_v4 improved NDRG1 degradation via ubiquitin-mediated proteolysis pathway. However, the repressive mechanism of NDRG1 at RNA level was still unknown. In this studies, we found that NDRG1-OT1_v4 decreased the NDRG1 promoter activities when we overexpressed NDRG1-OT1_v4 under hypoxia. The fragment (150-263 nt) of NDRG1-OT1_v4 repressed NDRG1 promoter activity significantly by increasing the binding affinity of hnRNPA1. On the other hand, another fragment (264-392 nt) of NDRG1-OT1_v4 improved NDRG1 promoter activity by recruiting HIF-1 alpha. In conclusion, we found a novel mechanism that different fragments of same lncRNA could cause opposite effects on the identical target gene.
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author2 |
Liang-Chuan Lai |
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Liang-Chuan Lai Ching-Ching Yeh 葉京青 |
author |
Ching-Ching Yeh 葉京青 |
spellingShingle |
Ching-Ching Yeh 葉京青 Different Effects of LncRNA NDRG1-OT1_v4 Fragments on Regulating NDRG1 Transcription in Breast Cancer Cells Under Hypoxia |
author_sort |
Ching-Ching Yeh |
title |
Different Effects of LncRNA NDRG1-OT1_v4 Fragments on Regulating NDRG1 Transcription in Breast Cancer Cells Under Hypoxia |
title_short |
Different Effects of LncRNA NDRG1-OT1_v4 Fragments on Regulating NDRG1 Transcription in Breast Cancer Cells Under Hypoxia |
title_full |
Different Effects of LncRNA NDRG1-OT1_v4 Fragments on Regulating NDRG1 Transcription in Breast Cancer Cells Under Hypoxia |
title_fullStr |
Different Effects of LncRNA NDRG1-OT1_v4 Fragments on Regulating NDRG1 Transcription in Breast Cancer Cells Under Hypoxia |
title_full_unstemmed |
Different Effects of LncRNA NDRG1-OT1_v4 Fragments on Regulating NDRG1 Transcription in Breast Cancer Cells Under Hypoxia |
title_sort |
different effects of lncrna ndrg1-ot1_v4 fragments on regulating ndrg1 transcription in breast cancer cells under hypoxia |
publishDate |
2018 |
url |
http://ndltd.ncl.edu.tw/handle/9n566s |
work_keys_str_mv |
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