RCSB Protein Data Bank 1D3D module: displaying positional features on macromolecular assemblies

• Main Authors: Bittrich, S. (Author), Burley, S.K (Author), Duarte, J.M (Author), Rose, Y. (Author), Segura, J. (Author)
• Format: Article
• Language: English
• Published: Oxford University Press 2022
• Subjects: article; nucleotide sequence; Protein Data Bank
• Online Access: View Fulltext in Publisher
• ISBN: 13674803 (ISSN)
• ISSN: 13674803 (ISSN)
• DOI: 10.1093/bioinformatics/btac317

Motivation: Mapping positional features from one-dimensional (1D) sequences onto three-dimensional (3D) structures of biological macromolecules is a powerful tool to show geometric patterns of biochemical annotations and provide a better understanding of the mechanisms underpinning protein and nucleic acid function at the atomic level. Results: We present a new library designed to display fully customizable interactive views between 1D positional features of protein and/or nucleic acid sequences and their 3D structures as isolated chains or components of macromolecular assemblies. © 2022 The Author(s) 2022. Published by Oxford University Press.