RCSB Protein Data Bank 1D3D module: displaying positional features on macromolecular assemblies

Motivation: Mapping positional features from one-dimensional (1D) sequences onto three-dimensional (3D) structures of biological macromolecules is a powerful tool to show geometric patterns of biochemical annotations and provide a better understanding of the mechanisms underpinning protein and nucle...

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Bibliographic Details
Main Authors: Bittrich, S. (Author), Burley, S.K (Author), Duarte, J.M (Author), Rose, Y. (Author), Segura, J. (Author)
Format: Article
Language:English
Published: Oxford University Press 2022
Subjects:
Online Access:View Fulltext in Publisher
LEADER 01412nam a2200217Ia 4500
001 10.1093-bioinformatics-btac317
008 220718s2022 CNT 000 0 und d
020 |a 13674803 (ISSN) 
245 1 0 |a RCSB Protein Data Bank 1D3D module: displaying positional features on macromolecular assemblies 
260 0 |b Oxford University Press  |c 2022 
856 |z View Fulltext in Publisher  |u https://doi.org/10.1093/bioinformatics/btac317 
520 3 |a Motivation: Mapping positional features from one-dimensional (1D) sequences onto three-dimensional (3D) structures of biological macromolecules is a powerful tool to show geometric patterns of biochemical annotations and provide a better understanding of the mechanisms underpinning protein and nucleic acid function at the atomic level. Results: We present a new library designed to display fully customizable interactive views between 1D positional features of protein and/or nucleic acid sequences and their 3D structures as isolated chains or components of macromolecular assemblies. © 2022 The Author(s) 2022. Published by Oxford University Press. 
650 0 4 |a article 
650 0 4 |a nucleotide sequence 
650 0 4 |a Protein Data Bank 
700 1 |a Bittrich, S.  |e author 
700 1 |a Burley, S.K.  |e author 
700 1 |a Duarte, J.M.  |e author 
700 1 |a Rose, Y.  |e author 
700 1 |a Segura, J.  |e author 
773 |t Bioinformatics  |x 13674803 (ISSN)  |g 38 12, 3304-3305