Fast parallel construction of variable-length Markov chains
Background: Alignment-free methods are a popular approach for comparing biological sequences, including complete genomes. The methods range from probability distributions of sequence composition to first and higher-order Markov chains, where a k-th order Markov chain over DNA has 4 k formal paramete...
Main Authors: | Gustafsson, J. (Author), Norberg, P. (Author), Qvick-Wester, J.R (Author), Schliep, A. (Author) |
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Format: | Article |
Language: | English |
Published: |
BioMed Central Ltd
2021
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Subjects: | |
Online Access: | View Fulltext in Publisher |
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