CAST as a Potential Oncogene, Identified by Machine Search, in Gastric Cancer Infiltrated with Macrophages and Associated with Lgr5

Background: Gastric cancer (GC) is one of the leading malignant diseases worldwide, especially in Asia. CAST is a potential oncogene in GC carcinogenesis. The character of macrophage infiltration in the GC microenvironment also remains unaddressed. Methods: We first applied machine searching to eval...

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Bibliographic Details
Main Authors: Chang, R. (Author), Chen, J.-S (Author), Wang, J.-T (Author), Yang, K.-T (Author), Yen, C.-C (Author)
Format: Article
Language:English
Published: MDPI 2022
Subjects:
WNT
Online Access:View Fulltext in Publisher
LEADER 02647nam a2200253Ia 4500
001 10.3390-biom12050670
008 220706s2022 CNT 000 0 und d
020 |a 2218273X (ISSN) 
245 1 0 |a CAST as a Potential Oncogene, Identified by Machine Search, in Gastric Cancer Infiltrated with Macrophages and Associated with Lgr5 
260 0 |b MDPI  |c 2022 
856 |z View Fulltext in Publisher  |u https://doi.org/10.3390/biom12050670 
520 3 |a Background: Gastric cancer (GC) is one of the leading malignant diseases worldwide, especially in Asia. CAST is a potential oncogene in GC carcinogenesis. The character of macrophage infiltration in the GC microenvironment also remains unaddressed. Methods: We first applied machine searching to evaluate gene candidates for GC. CAST expression and pan-cancer surveyance were analyzed using the Human Protein Atlas (HPA) and Gene Expression Profiling Interactive Analysis 2 (GEPIA2) database. The protein–protein interaction (PPI) network was downloaded from STRING. We investigated the impact of CAST on clinical prognosis using a Kaplan–Meier plotter. The correlations between CAST and Lgr5 and macrophage infiltration in GC were determined using TIMER 2.0. Finally, GeneMANIA was also used to evaluate the possible functional linkages between genes. Results: After the machine-assisted search, CAST expression was found to significantly influence the overall survival of GC patients. STRING revealed CAST-related proteomic and transcriptomic associations, mainly concerning the CAPN family. Moreover, CAST significantly impacts the prognosis of GC based on the validation of other datasets. Notably, high CAST expression was correlated with worse overall survival in GC patients (hazard ratio = 1.59; log-rank P = 9.4 × 10−8 ). CAST and Lgr5 expression were both positively correlated with WNT 2 and WNT 2B. Among the GC patients in several datasets, CAST and macrophage infiltration, evaluated together, showed no obvious association with poor clinical overall survival. Conclusions: CAST plays an important role in the clinical prognosis of GC and is associated with WNT 2/WNT 2B/Lgr5. Our study demonstrates that CAST’s influence on overall survival in GC is regulated by macrophage infiltration. © 2022 by the authors. Licensee MDPI, Basel, Switzerland. 
650 0 4 |a CAST 
650 0 4 |a gastric cancer 
650 0 4 |a Lgr5 
650 0 4 |a machine searching 
650 0 4 |a macrophage 
650 0 4 |a WNT 
700 1 0 |a Chang, R.  |e author 
700 1 0 |a Chen, J.-S.  |e author 
700 1 0 |a Wang, J.-T.  |e author 
700 1 0 |a Yang, K.-T.  |e author 
700 1 0 |a Yen, C.-C.  |e author 
773 |t Biomolecules