Analysis of Xylose Operon from Paenibacillus polymyxa ATCC842 and Development of Tools for Gene Expression

With numerous industrial applications, Paenibacillus polymyxa has been accepted as the candidate of the cell factory for many secondary metabolites. However, as the regulatory expression elements in P. polymyxa have not been systematically investigated, genetic modification on account of a specific...

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Main Authors: Ding, Z. (Author), Fang, Y. (Author), Gu, Z. (Author), Li, Y. (Author), Shi, G. (Author), Shi, Y. (Author), Wang, Z. (Author), Xin, Y. (Author), Yang, T. (Author), Zhang, L. (Author)
Format: Article
Language:English
Published: MDPI 2022
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Online Access:View Fulltext in Publisher
LEADER 02408nam a2200277Ia 4500
001 10.3390-ijms23095024
008 220706s2022 CNT 000 0 und d
020 |a 16616596 (ISSN) 
245 1 0 |a Analysis of Xylose Operon from Paenibacillus polymyxa ATCC842 and Development of Tools for Gene Expression 
260 0 |b MDPI  |c 2022 
856 |z View Fulltext in Publisher  |u https://doi.org/10.3390/ijms23095024 
520 3 |a With numerous industrial applications, Paenibacillus polymyxa has been accepted as the candidate of the cell factory for many secondary metabolites. However, as the regulatory expression elements in P. polymyxa have not been systematically investigated, genetic modification on account of a specific metabolism pathway for the strain is limited. In this study, a xylose-inducible operon in the xylan-utilizing bacterium ATCC842 was identified, and the relative operon transcription was increased to 186-fold in the presence of xylose, while the relative enhanced green fluorescent protein (eGFP) fluorescence intensity was promoted by over four-fold. By contrast, glucose downregulated the operon to 0.5-fold that of the control. The binding site of the operon was “ACTTAGTTTAA-GCAATAGACAAAGT”, and this can be degenerated to “ACTTWGTTTAWSSNATAVA-CAAAGT” in Paenibacillus spp., which differs from that in the Bacillus spp. xylose operon. The xy-lose operon binding site was transplanted to the constitutive promoter Pshuttle-09. The eGFP fluorescence intensity assay indicated that both the modified and original Pshuttle-09 had similar expression levels after induction, and the expression level of the modified promoter was decreased to 19.8% without induction. This research indicates that the operon has great potential as an ideal synthetic biology tool in Paenibacillus spp. that can dynamically regulate its gene circuit strength through xylose. © 2022 by the authors. Licensee MDPI, Basel, Switzerland. 
650 0 4 |a inducible expression system 
650 0 4 |a Paenibacillus polymyxa 
650 0 4 |a xylose operon 
700 1 0 |a Ding, Z.  |e author 
700 1 0 |a Fang, Y.  |e author 
700 1 0 |a Gu, Z.  |e author 
700 1 0 |a Li, Y.  |e author 
700 1 0 |a Shi, G.  |e author 
700 1 0 |a Shi, Y.  |e author 
700 1 0 |a Wang, Z.  |e author 
700 1 0 |a Xin, Y.  |e author 
700 1 0 |a Yang, T.  |e author 
700 1 0 |a Zhang, L.  |e author 
773 |t International Journal of Molecular Sciences