Identification of Key Genes and Pathways Associated with PIEZO1 in Bone-Related Disease Based on Bioinformatics

PIEZO1 is a mechano-sensitive ion channel that can sense various forms of mechanical stimuli and convert them into biological signals, affecting bone-related diseases. The present study aimed to identify key genes and signaling pathways in Piezo1-regulated bone-related diseases and to explain the po...

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Bibliographic Details
Main Authors: Wang, J. (Author), Zhang, C. (Author), Zhou, Y. (Author), Zhou, Z. (Author)
Format: Article
Language:English
Published: MDPI 2022
Subjects:
Online Access:View Fulltext in Publisher
LEADER 02320nam a2200241Ia 4500
001 10.3390-ijms23095250
008 220706s2022 CNT 000 0 und d
020 |a 16616596 (ISSN) 
245 1 0 |a Identification of Key Genes and Pathways Associated with PIEZO1 in Bone-Related Disease Based on Bioinformatics 
260 0 |b MDPI  |c 2022 
856 |z View Fulltext in Publisher  |u https://doi.org/10.3390/ijms23095250 
520 3 |a PIEZO1 is a mechano-sensitive ion channel that can sense various forms of mechanical stimuli and convert them into biological signals, affecting bone-related diseases. The present study aimed to identify key genes and signaling pathways in Piezo1-regulated bone-related diseases and to explain the potential mechanisms using bioinformatic analysis. The differentially expressed genes (DEGs) in tendon, femur, and humerus bone tissue; cortical bone; and bone-marrow-derived macrophages were identified with the criteria of |log2FC| > 1 and adjusted p-value < 0.05 analysis based on a dataset from GSE169261, GSE139121, GSE135282, and GSE133069, respectively, and visualized in a volcano plot. Venn diagram analyses were performed to identify the overlapping DEGs expressed in the above-mentioned tissues. Gene Ontology (GO) enrichment analysis, Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis, protein–protein interaction (PPI) analysis, and module analysis were also conducted. Furthermore, qRT-PCR was performed to validate the above results using primary chondrocytes. As a result, a total of 222 overlapping DEGs and 12 mostly overlapping DEGs were identified. Key Piezo1-related genes, such as Lcn2, Dkk3, Obscn, and Tnnt1, were identified, and pathways, such as Wnt/β-catenin and PI3k-Akt, were also identified. The present informatic study provides insight, for the first time, into the potential therapeutic targets of Piezo1-regulated bone-related diseases. © 2022 by the authors. Licensee MDPI, Basel, Switzerland. 
650 0 4 |a bioinformatics 
650 0 4 |a bone-related diseases 
650 0 4 |a overlapping genes 
650 0 4 |a Piezo1 
650 0 4 |a signaling pathways 
700 1 0 |a Wang, J.  |e author 
700 1 0 |a Zhang, C.  |e author 
700 1 0 |a Zhang, C.  |e author 
700 1 0 |a Zhou, Y.  |e author 
700 1 0 |a Zhou, Z.  |e author 
773 |t International Journal of Molecular Sciences