Algorithms 1 Biological experiments 1 Breast Neoplasms 1 Computational Biology 1 Computational framework 1 Cross validation 1 Disease associations 1 Diseases 1 Forecasting 1 Functional similarity 1 Hepatocellular carcinoma 1 Humans Latent feature 1 Learning systems 1 MicroRNAs 1 RNA 1 Semantic similarity 1 Semantics 1 Stacked autoencoder 1 State-of-the-art methods 1 XGBoost 1 algorithm 1 biology 1 breast tumor 1 genetics 1 human 1 miRNA-disease associations 1 microRNA 1