An Integrative Model of Cellular States, Plasticity, and Genetics for Glioblastoma

by Regev, Aviv
Published 2020

Developmental and oncogenic programs in H3K27M gliomas dissected by single-cell RNA-seq

by Regev, Aviv
Published 2020

Molecular Classification and Comparative Taxonomics of Foveal and Peripheral Cells in Primate Retina

by Regev, Aviv
Published 2020

Calcitonin Gene-Related Peptide Negatively Regulates Alarmin-Driven Type 2 Innate Lymphoid Cell Responses

by Wallrapp, Antonia, Burkett, Patrick R., Riesenfeld, Samantha J., Kim, Se-Jin, Christian, Elena, Abdulnour, Raja-Elie E., Thakore, Pratiksha I., Schnell, Alexandra, Lambden, Conner, Herbst, Rebecca H., Khan, Pavana, Tsujikawa, Kazutake, Xavier, Ramnik J., Chiu, Isaac M., Levy, Bruce D., Regev, Aviv, Kuchroo, Vijay K.
Published 2020

Combinatorial prediction of marker panels from single‐cell transcriptomic data

by Regev, Aviv, Kuchroo, Vijay K, Singer, Meromit
Published 2020

Deciphering eukaryotic gene-regulatory logic with 100 million random promoters

by de Boer, Carl G, Vaishnav, Eeshit Dhaval, Sadeh, Ronen, Abeyta, Esteban Luis, Friedman, Nir, Regev, Aviv
Published 2020

Single-cell RNA-seq reveals new types of human blood dendritic cells, monocytes, and progenitors

by Villani, Alexandra-Chloé, Satija, Rahul, Reynolds, Gary, Sarkizova, Siranush, Shekhar, Karthik, Fletcher, James, Griesbeck, Morgane, Butler, Andrew, Zheng, Shiwei, Lazo, Suzan, Jardine, Laura, Dixon, David, Stephenson, Emily, Nilsson, Emil, Grundberg, Ida, McDonald, David, Filby, Andrew, Li, Weibo, De Jager, Philip L., Rozenblatt-Rosen, Orit, Lane, Andrew A., Haniffa, Muzlifah, Regev, Aviv, Hacohen, Nir
Published 2018

Induction and transcriptional regulation of the co-inhibitory gene module in T cells

by Regev, Aviv
Published 2020

IL-33 Signaling Alters Regulatory T Cell Diversity in Support of Tumor Development

by Li, Amy, Herbst, Rebecca H., Canner, David Allen, Schenkel, Jason, Smith, Olivia C., Kim, Jonathan Y., Hillman, Michelle, Bhutkar, Arjun, Cuoco, Michael S., Rappazzo, C. Garrett, Rogers, Patricia, Dang, Celeste, Jerby-Arnon, Livnat, Rozenblatt-Rosen, Orit, Cong, Le, Birnbaum, Michael E, Regev, Aviv, Jacks, Tyler E
Published 2020

Anatomically and Functionally Distinct Lung Mesenchymal Populations Marked by Lgr5 and Lgr6

by Lee, Joo-Hyeon, Hofree, Matan, Choi, Jinwook, Han, Seungmin, Paschini, Margherita, Bhang, Dong Ha, Kim, Carla F., Tammela, Tuomas, Marjanovic, Nemanja, Canner, David Allen, Wu, Katherine, Jacks, Tyler E., Regev, Aviv
Published 2018

Electrical and synaptic integration of glioma into neural circuits

by Venkatesh, Humsa S., Morishita, Wade, Geraghty, Anna C., Silverbush, Dana, Gillespie, Shawn M., Arzt, Marlene, Tam, Lydia T., Espenel, Cedric, Ponnuswami, Anitha, Ni, Lijun, Woo, Pamelyn J., Taylor, Kathryn R., Agarwal, Amit, Regev, Aviv, Brang, David, Vogel, Hannes, Hervey-Jumper, Shawn, Bergles, Dwight E., Suvà, Mario L., Malenka, Robert C., Monje, Michelle
Published 2020

Nuclei multiplexing with barcoded antibodies for single-nucleus genomics

by Regev, Aviv
Published 2020

A Large Intergenic Noncoding RNA Induced by p53 Mediates Global Gene Repression in the p53 Response

by Huarte, Maite, Guttman, Mitchell, Feldser, David M., Garber, Manuel, Koziol, Magdalena J., Kenzelmann-Broz, Daniela, Khalil, Ahmad M., Zuk, Or, Amit, Ido, Rabani, Michal, Attardi, Laura D., Regev, Aviv, Rinn, John L., Lander, Eric Steven, Jacks, Tyler E
Published 2015

Genetic analysis of isoform usage in the human anti-viral response reveals influenza-specific regulation of ERAP2 transcripts under balancing selection

by Regev, Aviv
Published 2020

Acquired HER2 mutations in ER+ metastatic breast cancer confer resistance to estrogen receptor-directed therapies

by Nayar, Utthara, Cohen, Ofir, Kapstad, Christian, Cuoco, Michael S., Waks, Adrienne G., Wander, Seth A., Painter, Corrie, Freeman, Samuel, Persky, Nicole S., Marini, Lori, Helvie, Karla, Oliver, Nelly, Rozenblatt-Rosen, Orit, Ma, Cynthia X., Regev, Aviv, Winer, Eric P., Lin, Nancy U., Wagle, Nikhil
Published 2020

Hyperactivation of sympathetic nerves drives depletion of melanocyte stem cells

by Zhang, Bing, Ma, Sai, Rachmin, Inbal, He, Megan, Baral, Pankaj, Choi, Sekyu, Gonçalves, William A., Shwartz, Yulia, Fast, Eva M., Su, Yiqun, Zon, Leonard I., Regev, Aviv, Buenrostro, Jason D., Cunha, Thiago M., Chiu, Isaac M., Fisher, David E., Hsu, Ya-Chieh
Published 2020

The neuropeptide NMU amplifies ILC2-driven allergic lung inflammation

by Wallrapp, Antonia, Riesenfeld, Samantha J., Burkett, Patrick R., Abdulnour, Raja-Elie E., Nyman, Jackson, Dionne, Danielle, Hofree, Matan, Cuoco, Michael S., Rodman, Christopher, Farouq, Daneyal, Haas, Brian J., Tickle, Timothy L., Trombetta, John J., Baral, Pankaj, Klose, Christoph S. N., Mahlakõiv, Tanel, Artis, David, Rozenblatt-Rosen, Orit, Chiu, Isaac M., Levy, Bruce D., Kowalczyk, Monika S., Regev, Aviv, Kuchroo, Vijay K.
Published 2018

A single-cell survey of the small intestinal epithelium

by Haber, Adam L., Biton, Moshe, Rogel, Noga, Herbst, Rebecca H., Shekhar, Karthik, Smillie, Christopher, Burgin, Grace, Delorey, Toni M., Howitt, Michael R., Katz, Yarden, Tirosh, Itay, Beyaz, Semir, Dionne, Danielle, Zhang, Mei, Raychowdhury, Raktima, Garrett, Wendy S., Rozenblatt-Rosen, Orit, Shi, Hai Ning, Yilmaz, Omer, Xavier, Ramnik J., Regev, Aviv
Published 2018

Heterogeneous Responses of Hematopoietic Stem Cells to Inflammatory Stimuli Are Altered with Age

by Mann, Mati, Mehta, Arnav, de Boer, Carl G., Kowalczyk, Monika S., Lee, Kevin, Haldeman, Pearce, Rogel, Noga, Knecht, Abigail R., Farouq, Daneyal, Regev, Aviv, Baltimore, David
Published 2019

Densely Interconnected Transcriptional Circuits Control Cell States in Human Hematopoiesis

by Novershtern, Noa, Subramanian, Aravind, Lawton, Lee N., Mak, Raymond H., Haining, W. Nicholas, McConkey, Marie, Habib, Naomi, Yosef, Nir, Chang, Cindy Y., Shay, Tal, Frampton, Garrett M., Leskov, Ilya B., Nilsson, Bjorn, Preffer, Fred, Dombkowski, David, Evans, John W., Liefeld, Ted, Smutko, John S., Chen, Jianzhu, Friedman, Nir, Young, Richard A., Golub, Todd R., Regev, Aviv, Ebert, Benjamin L., Drake, Adam
Published 2014