Gene expression Background current 1 Cell-type-specific regulation 1 Cellular stress response 1 Chemical activation 1 Clustering algorithms 1 Co-expression networks 1 Coefficients of variations 1 Constrained optimization 1 Cultivation 1 Cytology 1 Differential gene expressions 1 Differentially expressed gene 1 Environmental stimuli 1 Escherichia coli 1 Expression patterns 1 Gems 1 Gene Expression Profiling 1 Gene expression patterns 1 Gene expression profiles 1 Gene regulatory network 1 Gene regulatory networks 1 Gibberellin signaling pathway 1 Gold standards 1 Histology 1 Hormone signal transduction 1 Humans 1 Indirect interaction 1 Indirect interactions 1 Inference methods 1