Searchlight: automated bulk RNA-seq exploration and visualisation using dynamically generated R scripts

by John J. Cole, Bekir A. Faydaci, David McGuinness, Robin Shaw, Rose A. Maciewicz, Neil A. Robertson, Carl S. Goodyear
Published 2021-08-01

SignS: a parallelized, open-source, freely available, web-based tool for gene selection and molecular signatures for survival and censored data

by Diaz-Uriarte Ramon
Published 2008-01-01

Seqcrawler: biological data indexing and browsing platform

by Sallou Olivier, Bretaudeau Anthony, Roult Aurelien
Published 2012-07-01

Pegasys: software for executing and integrating analyses of biological sequences

by Lett Drew, Quon Gerald, Druce Jeffrey C, Sawkins Jessica N, He David YM, Shah Sohrab P, Zheng Grace XY, Xu Tao, Ouellette BF Francis
Published 2004-04-01

Machine learning approach to predict protein phosphorylation sites by incorporating evolutionary information

by Sikder Abdur, Noman Nasimul, Biswas Ashis
Published 2010-05-01

Using a multiple-delivery-mode training approach to develop local capacity and infrastructure for advanced bioinformatics in Africa.

by Verena Ras, Gerrit Botha, Shaun Aron, Katie Lennard, Imane Allali, Shantelle Claassen-Weitz, Kilaza Samson Mwaikono, Dane Kennedy, Jessica R Holmes, Gloria Rendon, Sumir Panji, Christopher J Fields, Nicola Mulder
Published 2021-02-01

The Mastery Rubric for Bioinformatics: A tool to support design and evaluation of career-spanning education and training.

by Rochelle E Tractenberg, Jessica M Lindvall, Teresa K Attwood, Allegra Via
Published 2019-01-01

Thousands of rab GTPases for the cell biologist.

by Yoan Diekmann, Elsa Seixas, Marc Gouw, Filipe Tavares-Cadete, Miguel C Seabra, José B Pereira-Leal
Published 2011-10-01

ProteinHistorian: tools for the comparative analysis of eukaryote protein origin.

by John A Capra, Alexander G Williams, Katherine S Pollard
Published 2012-01-01

JPhyloIO: a Java library for event-based reading and writing of different phylogenetic file formats through a common interface

by Ben C. Stöver, Sarah Wiechers, Kai F. Müller
Published 2019-07-01

A7DB: a relational database for mutational, physiological and pharmacological data related to the α7 nicotinic acetylcholine receptor

by Sansom Mark SP, Brown Laurence, Jones Andrew K, Pym Luanda, Buckingham Steven D, Sattelle David B, Biggin Philip C
Published 2005-01-01

CANGS DB: a stand-alone web-based database tool for processing, managing and analyzing 454 data in biodiversity studies

by Schlötterer Christian, Boenigk Jens, Nolte Viola, Pandey Ram
Published 2011-06-01

A community resource benchmarking predictions of peptide binding to MHC-I molecules.

by Bjoern Peters, Huynh-Hoa Bui, Sune Frankild, Morten Nielson, Claus Lundegaard, Emrah Kostem, Derek Basch, Kasper Lamberth, Mikkel Harndahl, Ward Fleri, Stephen S Wilson, John Sidney, Ole Lund, Soren Buus, Alessandro Sette
Published 2006-06-01

A database for G proteins and their interaction with GPCRs

by Spyropoulos Ioannis C, Bagos Pantelis G, Elefsinioti Antigoni L, Hamodrakas Stavros J
Published 2004-12-01

Explorative visual analytics on interval-based genomic data and their metadata

by Vahid Jalili, Matteo Matteucci, Marco Masseroli, Stefano Ceri
Published 2017-12-01

GeneSrF and varSelRF: a web-based tool and R package for gene selection and classification using random forest

by Diaz-Uriarte Ramón
Published 2007-09-01

Building pathway clusters from Random Forests classification using class votes

by Zhao Hongyu, Pang Herbert
Published 2008-02-01

CANGS: a user-friendly utility for processing and analyzing 454 GS-FLX data in biodiversity studies

by Schlötterer Christian, Nolte Viola, Pandey Ram
Published 2010-01-01

miRMaid: a unified programming interface for microRNA data resources

by Krogh Anders, Jacobsen Anders, Kauppinen Sakari, Lindow Morten
Published 2010-01-01

Multi-Omics Approaches to Improve Mitochondrial Disease Diagnosis: Challenges, Advances, and Perspectives

by Justine Labory, Morgane Fierville, Samira Ait-El-Mkadem, Sylvie Bannwarth, Véronique Paquis-Flucklinger, Véronique Paquis-Flucklinger, Silvia Bottini
Published 2020-11-01