scClustViz – Single-cell RNAseq cluster assessment and visualization [version 2; peer review: 2 approved]

by Brendan T. Innes, Gary D. Bader
Published 2019-03-01

Cytokit: a single-cell analysis toolkit for high dimensional fluorescent microscopy imaging

by Eric Czech, Bulent Arman Aksoy, Pinar Aksoy, Jeff Hammerbacher
Published 2019-09-01

Pathway-Based Drug-Repurposing Schemes in Cancer: The Role of Translational Bioinformatics

by Enrique Hernández-Lemus, Enrique Hernández-Lemus, Mireya Martínez-García
Published 2021-01-01

Integration of EGA secure data access into Galaxy [version 1; referees: 2 approved]

by Youri Hoogstrate, Chao Zhang, Alexander Senf, Jochem Bijlard, Saskia Hiltemann, David van Enckevort, Susanna Repo, Jaap Heringa, Guido Jenster, Remond J.A. Fijneman, Jan-Willem Boiten, Gerrit A. Meijer, Andrew Stubbs, Jordi Rambla, Dylan Spalding, Sanne Abeln
Published 2016-12-01

Editor’s Pick: Clinical, Histological, and Molecular Classification of Hepatocellular Carcinoma: How Do They Get Along?

by Luca Quagliata
Published 2016-05-01

Identifying differential transcription factor binding in ChIP-seq

by Dai-Ying eWu, Danielle eBittencourt, Michael R Stallcup, Kimberly D. Siegmund
Published 2015-04-01

dictyExpress: a web-based platform for sequence data management and analytics in Dictyostelium and beyond

by Miha Stajdohar, Rafael D. Rosengarten, Janez Kokosar, Luka Jeran, Domen Blenkus, Gad Shaulsky, Blaz Zupan
Published 2017-06-01

Efficient strategy for the molecular diagnosis of intractable early-onset epilepsy using targeted gene sequencing

by John Hoon Rim, Se Hee Kim, In Sik Hwang, Soon Sung Kwon, Jieun Kim, Hyun Woo Kim, Min Jung Cho, Ara Ko, Song Ee Youn, Jihun Kim, Young Mock Lee, Hee Jung Chung, Joon Soo Lee, Heung Dong Kim, Jong Rak Choi, Seung-Tae Lee, Hoon-Chul Kang
Published 2018-02-01

CyTargetLinker: a cytoscape app to integrate regulatory interactions in network analysis.

by Martina Kutmon, Thomas Kelder, Pooja Mandaviya, Chris T A Evelo, Susan L Coort
Published 2013-01-01

IMGT/GeneInfo: T cell receptor gamma TRG and delta TRD genes in database give access to all TR potential V(D)J recombinations

by Jouvin-Marche Evelyne, Lefranc Marie-Paule, Chaume Denys, Bellahcene Fatena, Pasqual Nicolas, Hierle Vivien, Baum Thierry-Pascal, Marche Patrice, Demongeot Jacques
Published 2006-04-01

C-mii: a tool for plant miRNA and target identification

by Numnark Somrak, Mhuantong Wuttichai, Ingsriswang Supawadee, Wichadakul Duangdao
Published 2012-12-01

PROMPT: a protein mapping and comparison tool

by Frishman Dmitrij, Schmidt Thorsten
Published 2006-07-01

How Monte Carlo heuristics aid to identify the physical processes of drug release kinetics

by Paola Lecca
Published 2018-01-01

Integrated web service for improving alignment quality based on segments comparison

by Ye Yuzhen, Rychlewski Leszek, Plewczynski Dariusz, Jaroszewski Lukasz, Godzik Adam
Published 2004-07-01

Visualising biological data: a semantic approach to tool and database integration

by Marsh James, McDermott Philip, Thorne David, Pettifer Steve, Villéger Alice, Kell Douglas B, Attwood Teresa K
Published 2009-06-01

Genome-wide prediction of transcriptional regulatory elements of human promoters using gene expression and promoter analysis data

by Kim Seon-Young, Kim YongSung
Published 2006-07-01

MitoRes: a resource of nuclear-encoded mitochondrial genes and their products in Metazoa

by Grillo Giorgio, Turi Antonio, Licciulli Flavio, Catalano Domenico, Saccone Cecilia, D'Elia Domenica
Published 2006-01-01

Mayday - integrative analytics for expression data

by Nieselt Kay, Symons Stephan, Battke Florian
Published 2010-03-01

The Development of a Sustainable Bioinformatics Training Environment Within the H3Africa Bioinformatics Network (H3ABioNet)

by Shaun Aron, Paballo Abel Chauke, Verena Ras, Sumir Panji, Katherine Johnston, Nicola Mulder
Published 2021-09-01

Exploring and analysing single cell multi-omics data with VDJView

by Jerome Samir, Simone Rizzetto, Money Gupta, Fabio Luciani
Published 2020-02-01