Reply to Verhoef et al

by Astrup, A., Davis, T.A, Duggan, C.P, Hogans, B.B, MacFarlane, A.J, Manary, M., Odle, J., Prigeon, R.L, Smeets, P.A.M, Sorkin, J.D, Tobias, D.K, Tucker, K.L
Published 2022

Conditional prediction of consecutive tumor evolution using cancer progression models: What genotype comes next?

by Diaz-Colunga, J., Diaz-Uriarte, R.
Published 2021

Estimating the contribution of HIV-infected adults to household pneumococcal transmission in South Africa, 2016–2018: A hidden Markov modelling study

by Buys, A., Carrim, M., Cohen, C., Flasche, S., French, N., Hellferscee, O., Kahn, K., Kleynhans, J., Language, B., Lebina, L., Maake, L., Maake, L., Martinson, N.A, Martinson, N.A, Mathee, A., McMorrow, M., Mkhen, T., Mothlaoleng, K., Moyes, J., Ojal, J., PHIRST group, Piketh, S., Pinsent, A., Tempia, S., Thindwa, D., Treurnicht, F., von Gottberg, A., Wafawanaka, F., Wagner, R.G, Wolter, N., Xavier Gómes-Olivé, F.
Published 2021

DeepCME: A deep learning framework for computing solution statistics of the chemical master equation

by Gupta, A., Khammash, M., Schwab, C.
Published 2021

Decision prioritization and causal reasoning in decision hierarchies

by Zylberberg, A.
Published 2021

Haldane’s formula in Cannings models: the case of moderately strong selection

by Boenkost, F., González Casanova, A., Pokalyuk, C., Wakolbinger, A.
Published 2021

When and why direct transmission models can be used for environmentally persistent pathogens

by Benson, L., Davidson, R.S, Green, D.M, Hoyle, A., Hutchings, M.R, Marion, G.
Published 2021

Dynamic maximum entropy provides accurate approximation of structured population dynamics

by Barton, N.H, Bod'ová, K., Szép, E.
Published 2021

The impact of infection-derived immunity on disease dynamics

by King, A.A, Le, A., Magpantay, F.M.G, Mesbahi, A., Rohani, P.
Published 2021

Differential expression analysis using a model-based gene clustering algorithm for RNA-seq data

by Kadota, K., Osabe, T., Shimizu, K.
Published 2021

Non-small-cell lung cancer classification via RNA-Seq and histology imaging probability fusion

by Carrillo-Perez, F., Castillo-Secilla, D., Guillén, A., Herrera, L.J, Molina-Castro, Y., Morales, J.C, Rojas, I.
Published 2021

Concentration optimization of combinatorial drugs using Markov chain-based models

by Dang, D., Liu, L., Ma, S., Wang, W., Wang, Y.
Published 2021

Finding functional associations between prokaryotic virus orthologous groups: a proof of concept

by Dutilh, B.E, Pappas, N.
Published 2021

Sensitivity and feasibility of a one-dimensional morphoelastic model for post-burn contraction

by Egberts, G., van Zuijlen, P., Vermolen, F.
Published 2021

Pheniqs 2.0: accurate, high-performance Bayesian decoding and confidence estimation for combinatorial barcode indexing

by Galanti, L., Gunsalus, K.C, Shasha, D.
Published 2021

Estimating colocalization probability from limited summary statistics

by Davis, J.W, Degner, J.F, Dunbar, F., King, E.A
Published 2021

Root Digger: a root placement program for phylogenetic trees

by Bettisworth, B., Stamatakis, A.
Published 2021

Survival time prediction by integrating cox proportional hazards network and distribution function network

by Baek, E.-T, Kang, S.-R, Kim, S.H, Lee, G.S, Min, J.-J, Oh, I.-J, Yang, H.J
Published 2021

ProgPerm: Progressive permutation for a dynamic representation of the robustness of microbiome discoveries

by Do, K.-A, Jenq, R.R, Peterson, C.B, Shi, Y., Zhang, L.
Published 2021

Privacy-preserving chi-squared test of independence for small samples

by Ohsuga, A., Sei, Y.
Published 2021