ChIP-seq 4 Chromatin Immunoprecipitation 4 Chromatin Immunoprecipitation Sequencing 4 chromatin immunoprecipitation DNA sequence 3 High-Throughput Nucleotide Sequencing 3 Sequence Analysis, DNA 3 high throughput sequencing 3 Algorithms 2 Chromatin immunoprecipitation 2 Gene expression 2 High-throughput sequencing 2 Histone modification 2 Reproducibility of Results 2 algorithm 2 article 2 reproducibility 2 Algorithm 1 Animals 1 Background signals 1 Bias 1 Binding intensity 1 Biochemistry 1 Caenorhabditis elegans 1 Change point detection 1 Chromatin 1 Chromatin structure 1 Controls 1 Correction factors 1 DNA content 1