NERO: a biomedical named-entity (recognition) ontology with a large, annotated corpus reveals meaningful associations through text embedding

by Alachram, H., Ambite, J.L, Ananiadou, S., Beißbarth, T., Chambers, B., Christopoulou, F., Evans, J.A, Galstyan, A., Gao, X., Garg, S., Hermjakob, U., Khomtchouk, B.B, King, R., Li, M., Li, Y., Marcu, D., Matthew, J., Pan, W., Rzhetsky, A., Schoene, A.M, Sheng, E., Soldatova, L., Stevens, R., Wang, K., Wingender, E.
Published 2021

Transitions in development - an interview with Aissam Ikmi

by Zenner, H.L
Published 2022

Using predictive machine learning models for drug response simulation by calibrating patient-specific pathway signatures

by Bharadhwaj, V.S, Domingo-Fernández, D., Golriz Khatami, S., Hofmann-Apitius, M., Kodamullil, A.T, Mubeen, S.
Published 2021

Characterizing batch effects and binding site-specific variability in ChIP-seq data

by Chen, D., Du, D., Irizarry, R.A, Teng, M.
Published 2021

GraphOmics: an interactive platform to explore and integrate multi-omics data

by Daly, R., Wandy, J.
Published 2021

Protocol for the COG-UK hospital-onset COVID-19 infection (HOCI) multicentre interventional clinical study: evaluating the efficacy of rapid genome sequencing of SARS-CoV-2 in limi...

by Blackstone, J., Breuer, J., Copas, A., COVID-19 Genomics UK (COG-UK) Consortium, de Silva, T., Flowers, P., Hockey, L., Mapp, F., McComish, R., Nebbia, G., Panca, M., Partridge, D., Peters, C., Price, J., Snell, L.B, Stirrup, O.
Published 2022

Learned Embeddings from Deep Learning to Visualize and Predict Protein Sets

by Dallago, C., Heinzinger, M., Littmann, M., Lu, A.X, Min, S., Morton, J.T, Olenyi, T., Rost, B., Schütze, K., Yang, K.K, Yoon, S.
Published 2021

Biosemiotics comprehension of PrP code and prion disease

by Castilla, J., Coca, J.R, Eraña, H.
Published 2021

MeltingPlot, a user-friendly online tool for epidemiological investigation using High Resolution Melting data

by Batisti Biffignandi, G., Comandatore, F., Di Carlo, D., Panelli, S., Pasala, A.R, Perini, M., Piazza, A., Zuccotti, G.V
Published 2021

PIGNON: a protein–protein interaction-guided functional enrichment analysis for quantitative proteomics

by Byvsheva, A., Lavallée-Adam, M., Nadeau, R.
Published 2021

Long Noncoding RNA UCA1 in Gastrointestinal Cancers: Molecular Regulatory Roles and Patterns, Mechanisms, and Interactions

by Choy, K.W, Fuloria, N.K, Fuloria, S., Gopinath, S.C.B, Guad, R.M, Ramli, S., Rana, S., Sim, M.S, Subramaniyan, V., Wu, Y.S
Published 2021

Transcriptome profiling of PBMCs and formalin-fixed autopsy tissues from COVID-19 patients

by Graham, J.J, Kalbasi, A., Longhi, M.S, Vuerich, M., Wang, N.
Published 2022

Predicting chemotherapy response using a variational autoencoder approach

by Ramsey, S.A, Wei, Q.
Published 2021

qtlXplorer: an online systems genetics browser in the Eucalyptus Genome Integrative Explorer (EucGenIE)

by Christie, N., Delhomme, N., Mähler, N., Mannapperuma, C., Mizrachi, E., Myburg, A.A, Naidoo, S., Ployet, R., Street, N.R, van der Merwe, K.
Published 2021

Impact of dental cement on the peri-implant biofilm-microbial comparison of two different cements in an in vivo observational study

by Dötsch, A., Korsch, M., Marten, S.-M, Pieper, D.H, Vital, M., Walther, W.
Published 2018

Super.FELT: supervised feature extraction learning using triplet loss for drug response prediction with multi-omics data

by Lee, H., Park, S., Soh, J.
Published 2021

Matrix adhesion and remodeling diversifies modes of cancer invasion across spatial scales

by Bhat, R., Jolly, M.K, Pramanik, D.
Published 2021

5-Fluorouracil ethosomes–skin deposition and melanoma permeation synergism with microwave

by Khan, N.R, Wong, T.W
Published 2018

Multilocus sequence typing analysis and second-generation sequencing analysis of Salmonella Wandsworth

by Lu, Y., Wang, Y., Xu, X., Zhang, C.
Published 2021

Role of ascorbic acid in the regulation of epigenetic processes induced by Porphyromonas gingivalis in endothelial-committed oral stem cells

by Della Rocca, Y., Diomede, F., Fonticoli, L., Gatta, V., Guarnieri, S., Konstantinidou, F., Marconi, G.D, Pizzicannella, J., Rajan, T.S, Trubiani, O.
Published 2021