Comparative genomic analysis reveals varying levels of mammalian adaptation to coronavirus infections

by King, S.B, Singh, M.
Published 2021

TwinCons: Conservation score for uncovering deep sequence similarity and divergence

by Alvarez-Carreño, C., Penev, P.I, Petrov, A.S, Smith, E., Williams, L.D
Published 2021

Estimating repeat spectra and genome length from low-coverage genome skims with RESPECT

by Bafna, V., Balaban, M., Mirarab, S., Rachtman, E., Sarmashghi, S., Touri, B.
Published 2021

Ancestral Flowering Plant Chromosomes and Gene Orders Based on Generalized Adjacencies and Chromosomal Gene Co-Occurrences

by Jin, L., Leebens-Mack, J.H, Sankoff, D., Xu, Q., Zhang, X., Zhang, Y., Zheng, C.
Published 2021

Discrete coalescent trees

by Bryant, D., Collienne, L., Elmes, K., Fischer, M., Gavryushkin, A.
Published 2021

Revisiting Shao and Sokal’s B2 index of phylogenetic balance

by Bienvenu, F., Cardona, G., Scornavacca, C.
Published 2021

Genome-wide covariation in SARS-CoV-2

by Cresswell-Clay, E., Periwal, V.
Published 2021

Simpler and Faster Development of Tumor Phylogeny Pipelines

by Ali, S., Ciccolella, S., Lucarella, L., Patterson, M., Vedova, G.D
Published 2021

Evidence from simulation studies for selective constraints on the codon usage of the Angiosperm psbA gene

by Ashok, T., Barrett, J., Kalkus, A., Morton, B.R
Published 2021

Bayesian Phylogeographic Analysis Incorporating Predictors and Individual Travel Histories in BEAST

by Baele, G., Hong, S.L, Lemey, P., Suchard, M.A
Published 2021

Whole genome sequencing and the application of a SNP panel reveal primary evolutionary lineages and genomic variation in the lion (Panthera leo)

by Bauer, H., Bertola, L.D, Chege, M., de Iongh, H.H, Laros, J.F.J, Lesilau, F., Patterson, B.D, Schaap, O.D, Sogbohossou, E.A, Tumenta, P.N, Vermaat, M., Vrieling, K., White, P.A
Published 2022

The importance of biofilm formation for cultivation of a Micrarchaeon and its interactions with its Thermoplasmatales host

by Bharat, T.A.M, Bunk, B., Dombrowski, N., Gescher, J., Gfrerer, S., Hiller, K., Krause, S., Kuhlicke, U., Neu, T.R, Rachel, R., Reuse, C., Schmidt-Hohagen, K., Spang, A., Spröer, C., Villanueva, L., von Kügelgen, A.
Published 2022

SHOOT: phylogenetic gene search and ortholog inference

by Emms, D.M, Kelly, S.
Published 2022

Environmental surveillance of ESBL and carbapenemase-producing gram-negative bacteria in a Ghanaian Tertiary Hospital

by Acolatse, J.E.E, Akafity, G., Boostrom, I., Chalker, V.J, Dakroah, M.P, Portal, E.A.R, Sands, K., Spiller, O.B
Published 2022

Machine Learning Prediction of Non-Coding Variant Impact in Human Retinal cis-Regulatory Elements

by Challam, S., Cherry, T.J, Lee, A.Y, Luu, K., Timms, A.E, VandenBosch, L.S, Wu, Y.
Published 2022

Diverse aging rates in ectothermic tetrapods provide insights for the evolution of aging and longevity

by Angelini, C., Arntzen, J.W, Arsovski, D., Avcı, A., Baron, J.-P, Baskale, E., Bendik, N.F, Bernard, P., Bertoluci, J., Besnard, A., Boitaud, S., Bonnaire, E., Bonnet, X., Bosch, J., Briggs-Gonzalez, V., Bronikowski, A.M, Brown, G.P, Byrne, P.G, Capula, M., Cayuela, H., Cheylan, M., Christiansen, D.G, Clobert, J., Cox, R.M, Crivelli, A.J, Davis, C.L, de Villiers, F.A, Eby, L.A, Elmberg, J., Famelli, S., Fellers, G.M, Frétey, T., Gaillard, J.-M, Gardner, M.G, Garwood, J., Gillespie, G.R, Golubović, A., Grant, E.H.C, Grayson, K., Green, D.M, Griffiths, R.A, Grimm-Seyfarth, A., Grossenbacher, K., Guiller, G., Gutiérrez-Rodríguez, J., Halstead, B.J, Henle, K., Homan, R., Hossack, B.R, Iverson, J.B, Janzen, F.J, Jessop, T.S, Joly, P., Jreidini, N., Keall, S., King, R., Kleeman, P.M, Lambert, B.A, Lannoo, M.J, Lawing, A.M, Le Galliard, J.-F, Le Garff, B., Lemaître, J.-F, Léna, J.-P, Lenzi, O., Lettink, M., Levionnois, P., Limpus, C., Luiselli, L., Maerz, J.C, Martínez-Solano, I., Matthews, K., Mazzotti, F., McCaffery, R., Measey, J., Miaud, C., Miller, D.A.W, Mori, E., Muñoz, D., Muths, E., Nazirides, T., Nelson, N., O'Donnell, L., Olgun, K., Olivier, A., Olson, D.H, Pearson, D., Pichenot, J., Pilliod, D.S, Poitevin, F., Priol, P., Pyke, G., Ramos-Targarona, R., Reedy, A.M, Reinke, B.A, Richard, M., Ronget, V., Rose, F.L, Rugiero, L., Sánchez-Montes, G., Schmidt, B.R, Selman, W., Shine, R., Souza, F.L, Stanford, K., Stiles, R.M, Thirion, J.-M, Tomović, L., Tucker, A.D, Tully, T., Üzüm, N., Valenzuela-Sánchez, A., Warner, D.A, Whitaker, T.
Published 2022

Anatomy and phylogenetic relationships of Temnodontosaurus zetlandicus (Reptilia: Ichthyosauria)

by Bennion, R.F, Fischer, V., Laboury, A., Thuy, B., Weis, R.
Published 2022

How to Render Species Comparable Taxonomic Units Through Deep Time: A Case Study on Intraspecific Osteological Variability in Extant and Extinct Lacertid Lizards

by Delfino, M., Napoli, J.G, Tschopp, E., Upchurch, P., Wencker, L.C.M
Published 2022

An Evolving View of Phylogenetic Support

by Simon, C.
Published 2022

Assessing Confidence in Root Placement on Phylogenies: An Empirical Study Using Nonreversible Models for Mammals

by Lanfear, R., Naser-Khdour, S., Quang Minh, B.
Published 2022