Long-read transcriptome sequencing reveals abundant promoter diversity in distinct molecular subtypes of gastric cancer

by Kie Kyon Huang, Jiawen Huang, Jeanie Kar Leng Wu, Minghui Lee, Su Ting Tay, Vikrant Kumar, Kalpana Ramnarayanan, Nisha Padmanabhan, Chang Xu, Angie Lay Keng Tan, Charlene Chan, Dennis Kappei, Jonathan Göke, Patrick Tan
Published 2021-01-01

An Internal Promoter Drives the Expression of a Truncated Form of <i>CCC1</i> Capable of Protecting Yeast from Iron Toxicity

by Catarina Amaral, Cristina Teixeira Vicente, Soraia Marques Caetano, Ana Gaspar-Cordeiro, Yang Yang, Peter Cloetens, Célia V. Romão, Claudina Rodrigues-Pousada, Catarina Pimentel
Published 2021-06-01

Embryo polarity in moth flies and mosquitoes relies on distinct old genes with localized transcript isoforms

by Yoseop Yoon, Jeff Klomp, Ines Martin-Martin, Frank Criscione, Eric Calvo, Jose Ribeiro, Urs Schmidt-Ott
Published 2019-10-01

Regulation of PPARGC1A gene expression in trained and untrained human skeletal muscle

by Daniil V. Popov, Evgeny A. Lysenko, Pavel A. Makhnovskii, Nadia S. Kurochkina, Olga L. Vinogradova
Published 2017-12-01

AP-TSS: A New Method for the Analysis of RNA Expression from Particular and Challenging Transcription Start Sites

by Gabriel Le Berre, Virginie Hossard, Jean-Francois Riou, Anne-Laure Guieysse-Peugeot
Published 2020-05-01

A chelicerate-specific burst of nonclassical Dscam diversity

by Guozheng Cao, Yang Shi, Jian Zhang, Hongru Ma, Shouqing Hou, Haiyang Dong, Weiling Hong, Shuo Chen, Hao Li, Yandan Wu, Pengjuan Guo, Xu Shao, Bingbing Xu, Feng Shi, Yijun Meng, Yongfeng Jin
Published 2018-01-01

NF-κB Signaling and IL-4 Signaling Regulate SATB1 Expression via Alternative Promoter Usage During Th2 Differentiation

by Satyajeet P. Khare, Satyajeet P. Khare, Ankitha Shetty, Ankitha Shetty, Rahul Biradar, Indumathi Patta, Zhi Jane Chen, Ameya V. Sathe, Puli Chandramouli Reddy, Riitta Lahesmaa, Sanjeev Galande
Published 2019-04-01

Whole-transcriptome splicing profiling of E7.5 mouse primary germ layers reveals frequent alternative promoter usage during mouse early embryogenesis

by Xukun Lu, Zhen-Ao Zhao, Xiaoqing Wang, Xiaoxin Zhang, Yanhua Zhai, Wenbo Deng, Zhaohong Yi, Lei Li
Published 2018-03-01

Control of Immediate Early Gene Expression for Human Cytomegalovirus Reactivation

by Donna Collins-McMillen, Jeremy Kamil, Nathaniel Moorman, Felicia Goodrum
Published 2020-09-01

Cap-proximal nucleotides via differential eIF4E binding and alternative promoter usage mediate translational response to energy stress

by Ana Tamarkin-Ben-Harush, Jean-Jacques Vasseur, Françoise Debart, Igor Ulitsky, Rivka Dikstein
Published 2017-02-01

Epigenetic Regulation of the N-Terminal Truncated Isoform of Matrix Metalloproteinase-2 (NTT-MMP-2) and Its Presence in Renal and Cardiac Diseases

by Juliana de Oliveira Cruz, Juliana de Oliveira Cruz, Alessandra O. Silva, Jessyca M. Ribeiro, Marcelo R. Luizon, Marcelo R. Luizon, Carla S. Ceron
Published 2021-02-01

Alternative Promoter Use Governs the Expression of IgLON Cell Adhesion Molecules in Histogenetic Fields of the Embryonic Mouse Brain

by Toomas Jagomäe, Katyayani Singh, Mari-Anne Philips, Mohan Jayaram, Kadri Seppa, Triin Tekko, Scott F. Gilbert, Eero Vasar, Kersti Lilleväli
Published 2021-06-01

Alternative RNA Structure-Coupled Gene Regulations in Tumorigenesis

by Feng-Chi Chen
Published 2014-12-01

Transcriptional Complexity and Distinct Expression Patterns of auts2 Paralogs in Danio rerio

by Igor Kondrychyn, Lena Robra, Vatsala Thirumalai
Published 2017-08-01

Exercise- and Cold-Induced Human <i>PGC-1α</i> mRNA Isoform Specific Responses

by Camille Larson, Megan Opichka, Mark L. McGlynn, Christopher W. Collins, Dustin Slivka
Published 2020-08-01

Rbfox1 Is Expressed in the Mouse Brain in the Form of Multiple Transcript Variants and Contains Functional E Boxes in Its Alternative Promoters

by Sonia Casanovas, Sonia Casanovas, Laura Schlichtholz, Laura Schlichtholz, Sophia Mühlbauer, Sri Dewi, Martin Schüle, Dennis Strand, Susanne Strand, Lea Zografidou, Jennifer Winter, Jennifer Winter, Jennifer Winter
Published 2020-05-01

Selective Activation of Alternative MYC Core Promoters by Wnt-Responsive Enhancers

by Jorge A. Bardales, Evin Wieser, Hideya Kawaji, Yasuhiro Murakawa, Xavier Darzacq
Published 2018-05-01

Widespread overexpression from the four DNA hypermethylated HOX clusters in aggressive (IDHwt) glioma is associated with H3K27me3 depletion and alternative promoter usage

by Elisa Le Boiteux, Franck Court, Pierre‐Olivier Guichet, Catherine Vaurs‐Barrière, Isabelle Vaillant, Emmanuel Chautard, Pierre Verrelle, Bruno M. Costa, Lucie Karayan‐Tapon, Anne Fogli, Philippe Arnaud
Published 2021-08-01

The Human TET2 Gene Contains Three Distinct Promoter Regions With Differing Tissue and Developmental Specificities

by Hong Lou, Hongchuan Li, Kevin J. Ho, Luke L. Cai, Andy S. Huang, Tyler R. Shank, Michael R. Verneris, Michael L. Nickerson, Michael Dean, Stephen K. Anderson, Stephen K. Anderson
Published 2019-06-01

Krüppel -Like Factor 8 is a Stress-Responsive Transcription Factor that Regulates Expression of HuR

by Suman Govindaraju, Beth S. Lee
Published 2014-08-01