Algorithms 1 Biological entities 1 Biological networks 1 Biological systems 1 Blok Dichotomy 1 Boolean algebra 1 Boolean algebras with operators 1 Boolean networks 1 Cell Cycle 1 Complex gene regulatory networks 1 Computational framework 1 Factor graph 1 Forecasting 1 Gene Regulatory Networks 1 Gene regulatory networks 1 Genes 1 Graph algorithms 1 Graph theory 1 Intervention strategy 1 Mathematical formulation 1 Message passing 1 Message passing algorithm 1 Models, Biological 1 Models, Genetic 1 Network perturbation 1 Saccharomyces cerevisiae 1 Systems Biology 1 Systems biology 1 Yeast 1 algorithm 1