ProtRank: bypassing the imputation of missing values in differential expression analysis of proteomic data

by Matúš Medo, Daniel M. Aebersold, Michaela Medová
Published 2019-11-01

Can miRNA Indicate Risk of Illness after Continuous Exposure to <i>M. tuberculosis</i>?

by Cleonardo Augusto Silva, Arthur Ribeiro-dos-Santos, Wanderson Gonçalves Gonçalves, Pablo Pinto, Rafael Pompeu Pantoja, Tatiana Vinasco-Sandoval, André Maurício Ribeiro-dos-Santos, Mara Helena Hutz, Amanda Ferreira Vidal, Gilderlanio Santana Araújo, Ândrea Ribeiro-dos-Santos, Sidney Santos
Published 2021-04-01

PathExNET: A tool for extracting pathway expression networks from gene expression statistics

by George Minadakis, Alfonso Muñoz-Pomer Fuentes, George Tsouloupas, Irene Papatheodorou, George M. Spyrou
Published 2021-01-01

Transcriptomics Analysis for the Detection of Novel Drought Tolerance Genes in Jojoba (Simmondsia Chinensis)

by Othman Al-Dossary, Ardashir Kharabian, Ibrahim Al-Mssallem, Agnelo Furtado, Robert Henry
Published 2019-03-01

TCC-GUI: a Shiny-based application for differential expression analysis of RNA-Seq count data

by Wei Su, Jianqiang Sun, Kentaro Shimizu, Koji Kadota
Published 2019-03-01

Error estimates for the analysis of differential expression from RNA-seq count data

by Conrad J. Burden, Sumaira E. Qureshi, Susan R. Wilson
Published 2014-09-01

Impact of human gene annotations on RNA-seq differential expression analysis

by Yu Hamaguchi, Chao Zeng, Michiaki Hamada
Published 2021-10-01

Separating the Wheat from the Chaff: The Use of Upstream Regulator Analysis to Identify True Differential Expression of Single Genes within Transcriptomic Datasets

by Jeremiah Hadwen, Sarah Schock, Faraz Farooq, Alex MacKenzie, Julio Plaza-Diaz
Published 2021-06-01

UMI-count modeling and differential expression analysis for single-cell RNA sequencing

by Wenan Chen, Yan Li, John Easton, David Finkelstein, Gang Wu, Xiang Chen
Published 2018-05-01

ECFS-DEA: an ensemble classifier-based feature selection for differential expression analysis on expression profiles

by Xudong Zhao, Qing Jiao, Hangyu Li, Yiming Wu, Hanxu Wang, Shan Huang, Guohua Wang
Published 2020-02-01

JCD-DEA: a joint covariate detection tool for differential expression analysis on tumor expression profiles

by Yi Li, Yanan Liu, Yiming Wu, Xudong Zhao
Published 2019-06-01

aFold – using polynomial uncertainty modelling for differential gene expression estimation from RNA sequencing data

by Wentao Yang, Philip Rosenstiel, Hinrich Schulenburg
Published 2019-05-01

Normalization and statistical methods for crossplatform expression array analysis

by Mapiye, Darlington S
Published 2015

Differential Network Analysis based on Omic Data for Cancer Biomarker Discovery

by Zuo, Yiming
Published 2017

Transcriptome and Differential Expression Profiling Analysis of the Mechanism of Ca2+ Regulation in Peanut (Arachis hypogaea) Pod Development

by Sha Yang, Lin Li, Jialei Zhang, Yun Geng, Feng Guo, Jianguo Wang, Jingjing Meng, Na Sui, Shubo Wan, Xinguo Li
Published 2017-09-01

Identification of Core Genes and Screening of Potential Targets in Glioblastoma Multiforme by Integrated Bioinformatic Analysis

by Ji’an Yang, Qian Yang
Published 2021-02-01

RNA sequencing and transcriptome arrays analyses show opposing results for alternative splicing in patient derived samples

by Petr V. Nazarov, Arnaud Muller, Tony Kaoma, Nathalie Nicot, Cristina Maximo, Philippe Birembaut, Nhan L. Tran, Gunnar Dittmar, Laurent Vallar
Published 2017-06-01

XBSeq2: a fast and accurate quantification of differential expression and differential polyadenylation

by Yuanhang Liu, Ping Wu, Jingqi Zhou, Teresa L. Johnson-Pais, Zhao Lai, Wasim H. Chowdhury, Ronald Rodriguez, Yidong Chen
Published 2017-10-01

Impaired response of the bronchial epithelium to inflammation characterizes severe equine asthma

by Laurence Tessier, Olivier Côté, Mary Ellen Clark, Laurent Viel, Andrés Diaz-Méndez, Simon Anders, Dorothee Bienzle
Published 2017-09-01

Profiling of MicroRNAs in Midguts of Plutella xylostella Provides Novel Insights Into the Bacillus thuringiensis Resistance

by Jie Yang, Jie Yang, Jie Yang, Xuejiao Xu, Xuejiao Xu, Xuejiao Xu, Sujie Lin, Sujie Lin, Sujie Lin, Shiyao Chen, Guifang Lin, Guifang Lin, Guifang Lin, Qisheng Song, Jianlin Bai, Jianlin Bai, Jianlin Bai, Minsheng You, Minsheng You, Minsheng You, Miao Xie, Miao Xie, Miao Xie, Miao Xie
Published 2021-09-01