Can MiRBase Provide Positive Data for Machine Learning for the Detection of MiRNA Hairpins?

by Saçar Müşerref Duygu, Hamzeiy Hamid, Allmer Jens
Published 2013-06-01

Visualization and Analysis of MicroRNAs within KEGG Pathways using VANESA

by Hamzeiy Hamid, Suluyayla Rabia, Brinkrolf Christoph, Janowski Sebastian Jan, Hofestaedt Ralf, Allmer Jens
Published 2017-06-01

MADMAX – Management and analysis database for multiple ~omics experiments

by Lin Ke, Kools Harrie, de Groot Philip J., Gavai Anand K., Basnet Ram K., Cheng Feng, Wu Jian, Wang Xiaowu, Lommen Arjen, Hooiveld Guido J. E. J., Bonnema Guusje, Visser Richard G. F., Muller Michael R., Leunissen Jack A. M.
Published 2011-06-01

Synthetic Biology Open Language (SBOL) Version 2.0.0

by Bartley Bryan, Beal Jacob, Clancy Kevin, Misirli Goksel, Roehner Nicholas, Oberortner Ernst, Pocock Matthew, Bissell Michael, Madsen Curtis, Nguyen Tramy, Zhang Zhen, Gennari John H., Myers Chris, Wipat Anil, Sauro Herbert
Published 2015-06-01

A Study of the Short and Long-term Regulation of E. coli Metabolic Pathways

by Lourenço Anália, Carneiro Sónia, Pinto José P., Rocha Miguel, Ferreira Eugénio C., Rocha Isabel
Published 2011-12-01

A Novel Method to Detect Bias in Short Read NGS Data

by Alnasir Jamie, Shanahan Hugh P.
Published 2017-09-01

An evaluation of the performance of three semantic background knowledge sources in comparative anatomy

by Ophuizen Ernest A.A. van, Leunissen Jack A.M.
Published 2010-12-01

Discrimination of Brazilian propolis according to the seasoning using chemometrics and machine learning based on UV-Vis scanning data

by Tomazzoli Maíra M., Pai Neto Remi D., Moresco Rodolfo, Westphal Larissa, Zeggio Amelia R. S., Specht Leandro, Costa Christopher, Rocha Miguel, Maraschin Marcelo
Published 2015-12-01

Geno2proteo, a Tool for Batch Retrieval of DNA and Protein Sequences from Any Genomic or Protein Regions

by Li Yaoyong, Aguilar-Martinez Elisa, Sharrocks Andrew D.
Published 2019-07-01

Comparison of Optimization-Modelling Methods for Metabolites Production in Escherichia coli

by Lee Mee K., Mohamad Mohd Saberi, Choon Yee Wen, Mohd Daud Kauthar, Nasarudin Nurul Athirah, Ismail Mohd Arfian, Ibrahim Zuwairie, Napis Suhaimi, Sinnott Richard O.
Published 2020-05-01

The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core Release 2

by Hucka Michael, Bergmann Frank T., Chaouiya Claudine, Dräger Andreas, Hoops Stefan, Keating Sarah M., König Matthias, Novère Nicolas Le, Myers Chris J., Olivier Brett G., Sahle Sven, Schaff James C., Sheriff Rahuman, Smith Lucian P., Waltemath Dagmar, Wilkinson Darren J., Zhang Fengkai
Published 2019-06-01

Systems Biology Graphical Notation: Process Description language Level 1 Version 1.3

by Moodie Stuart, Le Novère Nicolas, Demir Emek, Mi Huaiyu, Villéger Alice
Published 2015-06-01

Multi-agent System for Obtaining Relevant Genes in Expression Analysis between Young and Older Women with Triple Negative Breast Cancer

by González-Briones Alfonso, Ramos Juan, De Paz Juan F., Corchado Juan M.
Published 2015-12-01

A computational model for GPCR-ligand interaction prediction

by Karimi Shiva, Ahmadi Maryam, Goudarzi Farjam, Ferdousi Reza
Published 2020-12-01

Network Expansion and Pathway Enrichment Analysis towards Biologically Significant Findings from Microarrays

by Wu Xiaogang, Reinhard Christoph, Li Shuyu D., Huang Hui, Wei Tao, Pandey Ragini, Chen Jake Y.
Published 2012-06-01

shRNA-Induced Knockdown of a Bioinformatically Predicted Target IL10 Influences Functional Parameters in Spontaneously Hypertensive Rats with Asthma

by Drevytska Tatiana, Morhachov Roman, Tumanovska Lesya, Portnichenko Georgiy, Nagibin Vasyl, Boldyriev Oleksiy, Lapikova-Bryhinska Tatiana, Gurianova Veronika, Dons’koi Borys, Freidin Maxim, Ivanisenko Vladimir, Bragina Elena Yu, Hofestädt Ralf, Dosenko Victor
Published 2018-12-01

Programmatic Access to FAIRified Digital Plant Genetic Resources

by Ghaffar Mehmood, Schüler Danuta, König Patrick, Arend Daniel, Junker Astrid, Scholz Uwe, Lange Matthias
Published 2020-01-01

Integrating Sequence Analysis with Biophysical Modelling for Accurate Transcription Start Site Prediction

by Djordjevic Marko
Published 2014-06-01

Computational miRNomics

by Allmer Jens, Yousef Malik
Published 2016-12-01

BacillusRegNet: A transcriptional regulation database and analysis platform for Bacillus species

by Misirli Goksel, Hallinan Jennifer, Röttger Richard, Baumbach Jan, Wipat Anil
Published 2014-06-01