Evaluating Autoencoder-Based Featurization and Supervised Learning for Protein Decoy Selection

by Fardina Fathmiul Alam, Taseef Rahman, Amarda Shehu
Published 2020-03-01

Decoy selection for protein structure prediction via extreme gradient boosting and ranking

by Nasrin Akhter, Gopinath Chennupati, Hristo Djidjev, Amarda Shehu
Published 2020-12-01

Unsupervised and Supervised Learning over the Energy Landscape for Protein Decoy Selection

by Nasrin Akhter, Gopinath Chennupati, Kazi Lutful Kabir, Hristo Djidjev, Amarda Shehu
Published 2019-10-01

An Energy Landscape Treatment of Decoy Selection in Template-Free Protein Structure Prediction

by Nasrin Akhter, Wanli Qiao, Amarda Shehu
Published 2018-06-01

From Extraction of Local Structures of Protein Energy Landscapes to Improved Decoy Selection in Template-Free Protein Structure Prediction

by Nasrin Akhter, Amarda Shehu
Published 2018-01-01

Graph-Based Community Detection for Decoy Selection in Template-Free Protein Structure Prediction

by Kazi Lutful Kabir, Liban Hassan, Zahra Rajabi, Nasrin Akhter, Amarda Shehu
Published 2019-02-01