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Showing 21 - 40 results of 104 for search '"kraken"', query time: 0.61s Refine Results
  1. 21
    The evaluation, application, and expansion of 16s amplicon metagenomics
    by Faits, Tyler
    Published 2021
    “... the metagenomics analysis tools Qiime 2, Mothur, PathoScope 2, and Kraken 2, in conjunction with reference...”
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  2. 22
    Nouvelles techniques informatiques pour la localisation et la classification de données de séquençage haut débit
    by Brinda, Karel
    Published 2016
    “.... Nous présentons Seed-Kraken, extension sur les graines espacées du logiciel populaire Kraken. En outre...”
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  3. 23
    A Finite Element Model for Underwater Sound Propagation in 2-D Environment
    by Yi-Qing Zhou, Wen-Yu Luo
    Published 2021-09-01
    “... the finite element model with the popular normal mode model KRAKEN by calculating sound fields in Pekeris...”
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    Article
  4. 24
    Bracken: estimating species abundance in metagenomics data
    “... with KrakEN) uses the taxonomic assignments made by Kraken, a very fast read-level classifier, along...”
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    Article
  5. 25
    MGmapper: Reference based mapping and taxonomy annotation of metagenomics sequence reads.
    “... annotations. A comparison between MGmapper and Kraken at species level, shows MGmapper assigns taxonomy...”
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    Article
  6. 26
    SEPATH: benchmarking the search for pathogens in human tissue whole genome sequence data leads to template pipelines
    “... of bacteria. mOTUs2 and Kraken are the highest performing individual tools achieving median genus-level F1...”
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    Article
  7. 27
    Using RNA-Sequencing Data to Examine Tissue-Specific Garlic Microbiomes
    “... and bulb cloves. With the Kraken2 tool, 57% of identified microbial reads were assigned to bacteria and 41...”
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    Article
  8. 28
    Simulation study and comparative evaluation of viral contiguous sequence identification tools
    by Glickman, C., Hendrix, J., Strong, M.
    Published 2021
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    Article
  9. 29
    Benchmark Evaluation of True Single Molecular Sequencing to Determine Cystic Fibrosis Airway Microbiome Diversity
    “... genomes from NCBI using PathoScope and Kraken and unique clade-specific marker genes using MetaPhlAn. A...”
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    Article
  10. 30
    A big data approach to metagenomics for all-food-sequencing
    “... pipeline. In comparison to the established tools CLARK, Kraken2, and Kraken2+Bracken it is superior...”
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    Article
  11. 31
    Simulation study and comparative evaluation of viral contiguous sequence identification tools
    by Cody Glickman, Jo Hendrix, Michael Strong
    Published 2021-06-01
    “... bioinformatic tools, including Vibrant, VirSorter, VirSorter2, VirFinder, DeepVirFinder, MetaPhinder, Kraken 2...”
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    Article
  12. 32
    Whole-Genome Sequencing Analysis to Identify Infection with Multiple Species of Nontuberculous Mycobacteria
    “... and identify mixed NTM infections. Analytical tools used included PubMLST, MetaPhlAn3, Kraken2, Mykrobe...”
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    Article
  13. 33
    An integrated system for profiling human microbiota
    by Ling-Wei Kung, 孔令維
    Published 2016
    “... used Uparse and Kraken two kinds of publish tool for taxonomic distribution analysis. Used NGS...”
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    Others
  14. 34
    Didaktické využití počítačových her ve výuce
    by Balažík, Jan
    Published 2007
    “... CD a dostupné na webové adrese http://kraken.pedf.cuni.cz/~balai2ap/. Cílem je na příkladu hry SDF...”
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    Dissertation
  15. 35
    A Coupling Graphic Pipeline with Normal Mode Model for Rapid Calculation of Underwater Acoustic Field
    by Jianghao Zhuo, Ling Wang, Ke Xu, Jianwei Wan
    Published 2021-01-01
    “... waveguide using the KRAKEN model at different frequencies. The research validates that the graphic pipeline...”
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    Article
  16. 36
    Social critique in the major novels of John Wyndham : civilization's secrets and nature's truths
    by Green, Michael Douglas
    Published 2000
    “...John Wyndham's four major novels: The Day of the Triffids , The Kraken Wakes , The Chrysalids...”
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    Others
  17. 37
    Especialização especulativa de valores baseada em parâmetros
    by Igor Rafael de Assis Costa
    Published 2013
    “... JavaScript benchmarks, SunSpider, V8 and Kraken, show that, in spite of its highly speculative nature, our...”
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    Others
  18. 38
    Syncmers are more sensitive than minimizers for selecting conserved k‑mers in biological sequences
    by Robert Edgar
    Published 2021-02-01
    “... with parameters used in the minimap2 read mapper and Kraken taxonomy prediction algorithm respectively show...”
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    Article
  19. 39
    Spectacular Tentacular: Transmedial Tentacles and Their Hegemonic Struggles in Cthulhu and Godzilla
    by Yorimitsu Hashimoto
    Published 2020-11-01
    “... of ferocious octopus attacking primates were invented. This fantasy of the Kraken was incorporated into monster...”
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    Article
  20. 40
    Evaluation of computational methods for human microbiome analysis using simulated data
    “... 2.0, Sigma, Kraken, ConStrains, Centrifuge and Taxator-tk, against a battery of metagenomic datasets...”
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    Article
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