Feeding Systems and Host Breeds Influence Ruminal Fermentation, Methane Production, Microbial Diversity and Metagenomic Gene Abundance

by Rajaraman Bharanidharan, Chang Hyun Lee, Krishnaraj Thirugnanasambantham, Krishnaraj Thirugnanasambantham, Ridha Ibidhi, Yang Won Woo, Hong-Gu Lee, Jong Geun Kim, Jong Geun Kim, Kyoung Hoon Kim, Kyoung Hoon Kim
Published 2021-07-01

Abundance of kinless hubs within soil microbial networks are associated with high functional potential in agricultural ecosystems

by Yu Shi, Manuel Delgado-Baquerizo, Yuntao Li, Yunfeng Yang, Yong-Guan Zhu, Josep Peñuelas, Haiyan Chu
Published 2020-09-01

Alterations, Interactions, and Diagnostic Potential of Gut Bacteria and Viruses in Colorectal Cancer

by Renyuan Gao, Renyuan Gao, Yefei Zhu, Yefei Zhu, Cheng Kong, Cheng Kong, Kai Xia, Kai Xia, Hao Li, Hao Li, Yin Zhu, Yin Zhu, Xiaohui Zhang, Xiaohui Zhang, Yongqiang Liu, Yongqiang Liu, Hui Zhong, Rong Yang, Chunqiu Chen, Chunqiu Chen, Nan Qin, Nan Qin, Huanlong Qin, Huanlong Qin
Published 2021-07-01

Soil Bacterial and Fungal Richness and Network Exhibit Different Responses to Long-Term Throughfall Reduction in a Warm-Temperate Oak Forest

by Jinglei Zhang, Shirong Liu, Cuiju Liu, Hui Wang, Junwei Luan, Xiaojing Liu, Xinwei Guo, Baoliang Niu
Published 2021-01-01

Meta-network: optimized species-species network analysis for microbial communities

by Pengshuo Yang, Shaojun Yu, Lin Cheng, Kang Ning
Published 2019-04-01

Successional Variation in the Soil Microbial Community in Odaesan National Park, Korea

by Hanbyul Lee, Seung-Yoon Oh, Young Min Lee, Yeongseon Jang, Seokyoon Jang, Changmu Kim, Young Woon Lim, Jae-Jin Kim
Published 2020-06-01

Pre-weaning Ruminal Administration of Differentially-Enriched, Rumen-Derived Inocula Shaped Rumen Bacterial Communities and Co-occurrence Networks of Post-weaned Dairy Calves

by Tansol Park, Tansol Park, Laura M. Cersosimo, Laura M. Cersosimo, Wenli Li, Wendy Radloff, Geoffrey I. Zanton
Published 2021-02-01

The Structure and Species Co-Occurrence Networks of Soil Denitrifying Bacterial Communities Differ Between A Coniferous and A Broadleaved Forests

by Jie Chen, Jiajia Li, Weijun Shen, Han Xu, Yide Li, Tushou Luo
Published 2019-09-01

Temporal Dynamics of the Soil Metabolome and Microbiome During Simulated Anaerobic Soil Disinfestation

by Shashika S. Hewavitharana, Emmi Klarer, Andrew J. Reed, Rachel Leisso, Brenton Poirier, Loren Honaas, David R. Rudell, Mark Mazzola
Published 2019-10-01

Disease-induced changes in plant microbiome assembly and functional adaptation

by Min Gao, Chao Xiong, Cheng Gao, Clement K. M. Tsui, Meng-Meng Wang, Xin Zhou, Ai-Min Zhang, Lei Cai
Published 2021-09-01

Seasonal Changes in Pinus tabuliformis Root-Associated Fungal Microbiota Drive N and P Cycling in Terrestrial Ecosystem

by Hai-Hua Wang, Hai-Hua Wang, Hong-Long Chu, Hong-Long Chu, Qing Dou, Huan Feng, Ming Tang, Ming Tang, Shuo-Xin Zhang, Shuo-Xin Zhang, Chun-Yan Wang
Published 2021-01-01

Probiotic Cocktail Identified by Microbial Network Analysis Inhibits Growth, Virulence Gene Expression, and Host Cell Colonization of Vancomycin-Resistant Enterococci

by Wei-Sheng Sun, Yuarn-Jang Lee, Kun-Nan Tsai, Yu-Hsuan Ho, Shiuh-Bin Fang
Published 2020-05-01

Oxalobacter formigenes-associated host features and microbial community structures examined using the American Gut Project

by Menghan Liu, Hyunwook Koh, Zachary D. Kurtz, Thomas Battaglia, Amanda PeBenito, Huilin Li, Lama Nazzal, Martin J. Blaser
Published 2017-08-01

Soil Microbial Composition and phoD Gene Abundance Are Sensitive to Phosphorus Level in a Long-Term Wheat-Maize Crop System

by Ming Lang, Ming Lang, Wenxin Zou, Wenxin Zou, Xiuxiu Chen, Chunqin Zou, Wei Zhang, Wei Zhang, Yan Deng, Yan Deng, Feng Zhu, Peng Yu, Xinping Chen, Xinping Chen, Xinping Chen
Published 2021-01-01

Molecular Ecological Network Complexity Drives Stand Resilience of Soil Bacteria to Mining Disturbances among Typical Damaged Ecosystems in China

by Jing Ma, Yongqiang Lu, Fu Chen, Xiaoxiao Li, Dong Xiao, Hui Wang
Published 2020-03-01

Fungal and Bacterial Diversity Patterns of Two Diversity Levels Retrieved From a Late Decaying Fagus sylvatica Under Two Temperature Regimes

by Sarah Muszynski, Florian Maurer, Sina Henjes, Marcus A. Horn, Matthias Noll
Published 2021-01-01

Geography, Host Genetics, and Cross‐Domain Microbial Networks Structure the Skin Microbiota of Fragmented Brazilian Atlantic Forest Frog Populations

by Anat M. Belasen, Maria A. Riolo, Molly C. Bletz, Mariana L. Lyra, L. Felipe Toledo, Timothy Y. James
Published 2021-07-01

Biotic interactions in microbial communities as modulators of biogeochemical processes: Methanotrophy as a model system.

by Adrian Ho, Roey Angel, Annelies J. Veraart, Anne Daebeler, Zhongjun Jia, Sang Yoon Kim, Frederiek - Maarten Kerckhof, Nico Boon, Paul Bodelier
Published 2016-08-01

Reflections and Insights on the Evolution of the Biological Remediation of Contaminated Soils

by Itziar Alkorta, Carlos Garbisu
Published 2021-09-01

Linking microbial co‐occurrences to soil ecological processes across a woodland‐grassland ecotone

by Samiran Banerjee, Peter H. Thrall, Andrew Bissett, Marcel G. A. van derHeijden, Alan E. Richardson
Published 2018-08-01