A functional analysis of omic network embedding spaces reveals key altered functions in cancer

by Ceddia, G., Doria-Belenguer, S., Malod-Dognin, N., Pržulj, N., Xenos, A.
Published 2023

MicrobeAnnotator: a user-friendly, comprehensive functional annotation pipeline for microbial genomes

by Conrad, R.E, Konstantinidis, K.T, Ruiz-Perez, C.A
Published 2021

Functional Genomic Identification of Predictors of Sensitivity and Mechanisms of Resistance to Multivalent Second-Generation TRAIL-R2 Agonists

by Barthorpe, S., Bateson, J., Chatzipli, A., Ciznadija, D., Crawford, N., Gallagher, L., Garnett, M., Grinkevitch, V., Iyer, V., Lees, A., Longley, D.B, McAllister, K., McCann, C., McDade, S.S, McDermott, U., Michaut, M., Prehn, J., Price, S., Sloma, I., Tice, D.A, Wappett, M., Wesa, A., Wessels, L., Young, J.
Published 2022

Selection and Evaluation of Candidate Reference Genes for Quantitative Real-Time PCR in Aboveground Tissues and Drought Conditions in Rhododendron Delavayi

by Cai, Y., Du, G., Wang, J., Zhang, L., Zhang, M.
Published 2022

Genome assembly of the JD17 soybean provides a new reference genome for comparative genomics

by Chen, N., Chen, S., Fan, W., Kudrna, D., Lee, S., Lei, L., Liu, J., Liu, M., Wang, X., Wing, R.A, Wu, H., Xu, Q., Yang, C., Yi, X., Zhang, B., Zhang, J., Zhang, M.
Published 2022

TAGOPSIN: collating taxa-specific gene and protein functional and structural information

by Bundhoo, E., Ghoorah, A.W, Jaufeerally-Fakim, Y.
Published 2021

Evolution of binding preferences among whole-genome duplicated transcription factors

by Barkai, N., Gera, T., Jonas, F., More, R.
Published 2022

bootRanges: flexible generation of null sets of genomic ranges for hypothesis testing

by Davis, E.S, Dozmorov, M.G, Lee, S., Love, M.I, Mu, W., Phanstiel, D.H
Published 2023

Finding functional associations between prokaryotic virus orthologous groups: a proof of concept

by Dutilh, B.E, Pappas, N.
Published 2021

Computational Structural and Functional Analyses of ORF10 in Novel Coronavirus SARS-CoV-2 Variants to Understand Evolutionary Dynamics

by Mishra, S.
Published 2022

Electronic Health Records and Genomics: Perspectives from the Association for Molecular Pathology...

by Abruzzo, L.V, Carter, A.B, Hirschhorn, J.W, Jones, D., Jordan, D.C, Nassiri, M., Ogino, S., Patel, N.R, Roy, S., Suciu, C.G, Temple-Smolkin, R.L, Zehir, A.
Published 2022

Fusion of single-cell transcriptome and DNA-binding data, for genomic network inference in cortical development

by Bartlett, T.
Published 2021

HiCube: interactive visualization of multiscale and multimodal Hi-C and 3D genome data

by Hu, Y., Ma, W., Pun, S., Ye, T.
Published 2023

Highly Selective, CRISPR/Cas9-Mediated Isolation of Genes and Genomic Loci from Complex Genomes by TAR Cloning in Yeast

by Kim, J.-H, Kouprina, N., Larionov, V.
Published 2021

Grouping of genomic markers in populations with family structure

by Doschoris, M., Klosa, J., Wittenburg, D.
Published 2021

HapSolo: an optimization approach for removing secondary haplotigs during diploid genome assembly and scaffolding

by Gaut, B.S, Long, A.D, Solares, E.A, Tao, Y.
Published 2021

Human Papillomavirus Genome Integration and Head and Neck Cancer

by Carey, T.E, Pinatti, L.M, Walline, H.M
Published 2018

Untangling the genomics of noise-induced hearing loss and tinnitus: Contributions of Mus musculus and Homo sapiens

by Clifford, R.E, Hertzano, R., Ohlemiller, K.K
Published 2019

The impact of whole genome duplications on the human gene regulatory networks

by Caselle, M., Mottes, F., Osella, M., Villa, C.
Published 2021

Blocking drug efflux mechanisms facilitate genome engineering process in hypercellulolytic fungus, Penicillium funiculosum NCIM1228

by Gupta, M., Nair, A.M, Ogunyewo, O.A, Pasari, N., Randhawa, A., Sinha, T., Verma, P.K, Verma, S., Yazdani, S.S
Published 2021