Benchmark of 16S rRNA gene amplicon sequencing using Japanese gut microbiome data from the V1–V2 and V3–V4 primer sets

by Shoichiro Kameoka, Daisuke Motooka, Satoshi Watanabe, Ryuichi Kubo, Nicolas Jung, Yuki Midorikawa, Natsuko O. Shinozaki, Yu Sawai, Aya K. Takeda, Shota Nakamura
Published 2021-07-01

Amino acid transporter (AAT) gene family in foxtail millet (Setaria italica L.): widespread family expansion, functional differentiation, roles in quality formation and response to...

by Yang Yang, Yongmao Chai, Jiayi Liu, Jie Zheng, Zhangchen Zhao, Aduragbemi Amo, Chunge Cui, Qiumei Lu, Liang Chen, Yin-Gang Hu
Published 2021-07-01

Transcriptome and metabolome analyses of cold and darkness-induced pellicle cysts of Scrippsiella trochoidea

by Xin Guo, Zhaohui Wang, Lei Liu, Yang Li
Published 2021-07-01

De novo transcriptome analysis of white teak (Gmelina arborea Roxb) wood reveals critical genes involved in xylem development and secondary metabolism

by Mary Luz Yaya Lancheros, Krishan Mohan Rai, Vimal Kumar Balasubramanian, Lavanya Dampanaboina, Venugopal Mendu, Wilson Terán
Published 2021-07-01

Analysis of merged whole blood transcriptomic datasets to identify circulating molecular biomarkers of feed efficiency in growing pigs

by Farouk Messad, Isabelle Louveau, David Renaudeau, Hélène Gilbert, Florence Gondret
Published 2021-07-01

Genome wide effects of oleic acid on cultured bovine granulosa cells: evidence for the activation of pathways favoring folliculo-luteal transition

by Vengala Rao Yenuganti, Dirk Koczan, Jens Vanselow
Published 2021-06-01

A functional map of genomic HIF1α-DNA complexes in the eye lens revealed through multiomics analysis

by Joshua Disatham, Lisa Brennan, Daniel Chauss, Jason Kantorow, Behdad Afzali, Marc Kantorow
Published 2021-07-01

Modelling segmental duplications in the human genome

by Eldar T. Abdullaev, Iren R. Umarova, Peter F. Arndt
Published 2021-07-01

Temporal dynamics of teleost populations during the Pleistocene: a report from publicly available genome data

by Jia Li, Chao Bian, Yunhai Yi, Hui Yu, Xinxin You, Qiong Shi
Published 2021-06-01

DNA methylation-based sex classifier to predict sex and identify sex chromosome aneuploidy

by Yucheng Wang, Eilis Hannon, Olivia A. Grant, Tyler J. Gorrie-Stone, Meena Kumari, Jonathan Mill, Xiaojun Zhai, Klaus D. McDonald-Maier, Leonard C. Schalkwyk
Published 2021-06-01

Comparative analyses of the Hymenoscyphus fraxineus and Hymenoscyphus albidus genomes reveals potentially adaptive differences in secondary metabolite and transposable element repe...

by Malin Elfstrand, Jun Chen, Michelle Cleary, Sandra Halecker, Katarina Ihrmark, Magnus Karlsson, Kateryna Davydenko, Jan Stenlid, Marc Stadler, Mikael Brandström Durling
Published 2021-07-01

Genome sequencing identified novel mechanisms underlying virescent mutation in upland cotton Gossypiuma hirsutum

by Jin Gao, Yang Shi, Wei Wang, Yong-Hui Wang, Hua Yang, Qing-Hua Shi, Jian-Ping Chen, Yan-Ru Sun, Li-Wang Cai
Published 2021-07-01

Embryonic thermal manipulation impacts the postnatal transcriptome response of heat-challenged Japanese quails

by Anaïs Vitorino Carvalho, Christelle Hennequet-Antier, Aurélien Brionne, Sabine Crochet, Justine Jimenez, Nathalie Couroussé, Anne Collin, Vincent Coustham
Published 2021-06-01

Genome-wide profiling of long noncoding RNAs involved in wheat spike development

by Pei Cao, Wenjuan Fan, Pengjia Li, Yuxin Hu
Published 2021-07-01

Insertion of an endogenous Jaagsiekte sheep retrovirus element into the BCO2 - gene abolishes its function and leads to yellow discoloration of adipose tissue in Norwegian Spælsau...

by Matthew Kent, Michel Moser, Inger Anne Boman, Kristine Lindtveit, Mariann Árnyasi, Kristil Kindem Sundsaasen, Dag Inge Våge
Published 2021-06-01

Genome-wide identification and characterization of caffeoyl-coenzyme A O-methyltransferase genes related to the Fusarium head blight response in wheat

by Guang Yang, Wenqiu Pan, Ruoyu Zhang, Yan Pan, Qifan Guo, Weining Song, Weijun Zheng, Xiaojun Nie
Published 2021-07-01

Maternal cold exposure induces distinct transcriptome changes in the placenta and fetal brown adipose tissue in mice

by Sujoy Ghosh, Chul-Hong Park, Jisu Lee, Nathan Lee, Rui Zhang, Clara Huesing, Dorien Reijnders, Jennifer Sones, Heike Münzberg, Leanne Redman, Ji Suk Chang
Published 2021-07-01

Female-specific genomic regions and molecular sex identification of the clearhead icefish (Protosalanx hyalocranius)

by Teng-Fei Xing, Yu-Long Li, Jin-Xian Liu
Published 2021-07-01

Integrative analysis of histomorphology, transcriptome and whole genome resequencing identified DIO2 gene as a crucial gene for the protuberant knob located on forehead in geese

by Yan Deng, Shenqiang Hu, Chenglong Luo, Qingyuan Ouyang, Li Li, Jiaming Ma, Zhenping Lin, Junpeng Chen, Hehe Liu, Jiwei Hu, Guohong Chen, Dingming Shu, Yuxuan Pan, Bo Hu, Hua He, Hao Qu, Jiwen Wang
Published 2021-06-01

Validation of reference genes for whole blood gene expression analysis in cord blood of preterm and full-term neonates and peripheral blood of healthy adults

by Kristin Hieronymus, Benjamin Dorschner, Felix Schulze, Neeta L. Vora, Joel S. Parker, Jennifer Lucia Winkler, Angela Rösen-Wolff, Stefan Winkler
Published 2021-06-01