Expanding the MicroRNA Targeting Code: Functional Sites with Centered Pairing

by Shin, Chanseok, Nam, Jin-Wu, Farh, Kyle Kai-How, Chiang, H. Rosaria, Shkumatava, Alena, Bartel, David
Published 2012

Improved Ribosome-Footprint and mRNA Measurements Provide Insights into Dynamics and Regulation of Yeast Translation

by Weinberg, David E, Shah, Premal, Hussmann, Jeffrey A, Plotkin, Joshua B, Eichhorn, Stephen William, Bartel, David
Published 2016

mRNA poly(A)-tail changes specified by deadenylation broadly reshape translation in Drosophila oocytes and early embryos

by Eichhorn, Stephen William, Subtelny, Alexander Orest, Orr-Weaver, Terry, Bartel, David, Kronja, Iva, Kwasnieski, Jamie C.
Published 2017

m⁶A modification of a 3' UTR site reduces RME1 mRNA levels to promote meiosis

by Bushkin, G. Guy, Morgan, Jeffrey T. (Jeffrey Thomas), Richardson, Kris, Lewis, Caroline, Chan, Sze Ham, Bartel, David, Fink, Gerald R
Published 2020

Widespread Changes in the Posttranscriptional Landscape at the Drosophila Oocyte-to-Embryo Transition

by Kronja, Iva, Yuan, Bingbing, Dzeyk, Kristina, Krijgsveld, Jeroen, Eichhorn, Stephen William, Bartel, David, Orr-Weaver, Terry L., Orr-Weaver, Terry
Published 2015

Genetic dissection of the miR-200-Zeb1 axis reveals its importance in tumor differentiation and invasion

by Title, Alexandra C., Pires, Nuno D., Hasenöhrl, Lynn, Godbersen, Svenja, Stokar-Regenscheit, Nadine, Stoffel, Markus, Hong, Sue-Jean, Bartel, David
Published 2019

RNAi in Budding Yeast

by Drinnenberg, Ines A., Weinberg, David E., Xie, Kathleen Dongqin, Mower, Jeffrey P., Wolfe, Kenneth H., Bartel, David, Fink, Gerald R
Published 2013

Extensive alternative polyadenylation during zebrafish development

by Ulitsky, Igor, Shkumatava, Alena, Jan, Calvin H., Subtelny, Alexander Orest, Koppstein, David Neal Pira, Bell, George W., Sive, Hazel L., Bartel, David
Published 2013

New CRISPR Mutagenesis Strategies Reveal Variation in Repair Mechanisms among Fungi

by Vyas, Valmik K., Bushkin, G. Guy, Bernstein, Douglas A., Sewastianik, Magdalena, Barrasa, M. Inmaculada, Getz, Matthew Aaron, Bartel, David, Fink, Gerald R
Published 2018

The influence of microRNAs and poly(A) tail length on endogenous mRNA-protein complexes

by Wang, Miranda, Lugowski, Andrew, Nicholson, Beth, Laver, John D., Sidhu, Sachdev S., Smibert, Craig A., Lipshitz, Howard D., Subtelny, Alexander Orest, Rissland, Olivia S., Bartel, David
Published 2018

A portable RNA sequence whose recognition by a synthetic antibody facilitates structural determination

by Koldobskaya, Yelena, Duguid, Erica M., Shechner, David M., Suslov, Nikolai B., Ye, Jingdong, Sidhu, Sachdev S., Bartel, David, Koide, Shohei, Kossiakoff, Anthony A., Piccirilli, Joseph A.
Published 2012

mRNA Destabilization Is the Dominant Effect of Mammalian MicroRNAs by the Time Substantial Repression Ensues

by Rodriguez-Mias, Ricard A, Shin, Chanseok, Baek, Daehyun, Hsu, Shu-hao, Ghoshal, Kalpana, Villén, Judit, Eichhorn, Stephen William, Guo, Huili, McGeary, Sean Edward, Bartel, David
Published 2018

Stalled Spliceosomes Are a Signal for RNAi-Mediated Genome Defense

by Dumesic, Phillip A, Natarajan, Prashanthi, Chen, Changbin, Drinnenberg, Ines A, Schiller, Benjamin J, Thompson, James, Moresco, James J, Yates, John R, Madhani, Hiten D, Bartel, David
Published 2018

Independent regulation of vertebral number and vertebral identity by microRNA-196 paralogs

by Wong, Siew Fen Lisa, Agarwal, Vikram, Mansfield, Jennifer H., Denans, Nicolas, Schwartz, Matthew G., Prosser, Haydn M., Tabin, Clifford J., McGlinn, Edwina, Bartel, David, Pourquie, Olivier
Published 2016

The helicase Ded1p controls use of near-cognate translation initiation codons in 5' UTRs

by Guenther, Ulf-Peter, Weinberg, David E., Zubradt, Meghan M., Tedeschi, Frank A., Stawicki, Brittany N., Zagore, Leah L., Brar, Gloria A., Licatalosi, Donny D., Bartel, David, Weissman, Jonathan S., Jankowsky, Eckhard
Published 2020

Global Analyses of the Effect of Different Cellular Contexts on MicroRNA Targeting

by Nam, Jin-Wu, Rissland, Olivia S, Abreu-Goodger, Cei, Jan, Calvin H., Agarwal, Vikram, Yildirim, Muhammed A, Rodriguez, Antony, Koppstein, David Neal Pira, Bartel, David, Rissland, Olivia S., Jan, Calvin H., Yildirim, Muhammed A.
Published 2015

Genome-Scale Networks Link Neurodegenerative Disease Genes to α-Synuclein through Specific Molecular Pathways

by Khurana, Vikram, Chung, Chee Yeun, Auluck, Pavan K., Fanning, Saranna, Tardiff, Daniel F., Bartels, Theresa, Eichhorn, Stephen W., Benyamini, Hadar, Lou, Yali, Nutter-Upham, Andy, Baru, Valeriya, Freyzon, Yelena, Costanzo, Michael, San Luis, Bryan-Joseph, Schöndorf, David C., Barrasa, M. Inmaculada, Ehsani, Sepehr, Sanjana, Neville, Zhong, Quan, Gasser, Thomas, Bartel, David P., Vidal, Marc, Deleidi, Michela, Boone, Charles, Berger, Bonnie, Lindquist, Susan, Peng, Jian, Koeva, Martina I, Tuncbag, Nurcan, Fraenkel, Ernest
Published 2018