Genome Sequencing and Transcriptome Analysis Reveal Recent Species-Specific Gene Duplications in the Plastic Gilthead Sea Bream (Sparus aurata)

by Jaume Pérez-Sánchez, Fernando Naya-Català, Beatriz Soriano, M. Carla Piazzon, Ahmed Hafez, Toni Gabaldón, Carlos Llorens, Ariadna Sitjà-Bobadilla, Josep A. Calduch-Giner
Published 2019-12-01

Investigation of Candida parapsilosis virulence regulatory factors during host-pathogen interaction

by Renáta Tóth, Vitor Cabral, Ernst Thuer, Flóra Bohner, Tibor Németh, Csaba Papp, Leonardo Nimrichter, Gergő Molnár, Csaba Vágvölgyi, Toni Gabaldón, Joshua D. Nosanchuk, Attila Gácser
Published 2018-01-01

Mitochondrial Carriers Link the Catabolism of Hydroxyaromatic Compounds to the Central Metabolism in Candida parapsilosis

by Igor Zeman, Martina Neboháčová, Gabriela Gérecová, Kornélia Katonová, Eva Jánošíková, Michaela Jakúbková, Ivana Centárová, Ivana Dunčková, L'ubomír Tomáška, Leszek P. Pryszcz, Toni Gabaldón, Jozef Nosek
Published 2016-12-01

Eukaryotic transporters for hydroxyderivatives of benzoic acid

by Andrea Cillingová, Igor Zeman, Renáta Tóth, Martina Neboháčová, Ivana Dunčková, Mária Hölcová, Michaela Jakúbková, Gabriela Gérecová, Leszek P. Pryszcz, Ľubomír Tomáška, Toni Gabaldón, Attila Gácser, Jozef Nosek
Published 2017-08-01

MICU1 Confers Protection from MCU-Dependent Manganese Toxicity

by Jennifer Wettmarshausen, Valerie Goh, Kai-Ting Huang, Daniela M. Arduino, Utkarsh Tripathi, Anja Leimpek, Yiming Cheng, Alexandros A. Pittis, Toni Gabaldón, Dejana Mokranjac, György Hajnóczky, Fabiana Perocchi
Published 2018-11-01

Echinocandin-Induced Microevolution of Candida parapsilosis Influences Virulence and Abiotic Stress Tolerance

by Csaba Papp, Katica Kocsis, Renáta Tóth, László Bodai, Jesse R. Willis, Ewa Ksiezopolska, Nancy E. Lozoya-Pérez, Csaba Vágvölgyi, Hector Mora Montes, Toni Gabaldón, Joshua D. Nosanchuk, Attila Gácser
Published 2018-11-01

Impact of the mitochondrial genetic background in complex III deficiency.

by Mari Carmen Gil Borlado, David Moreno Lastres, Maritza Gonzalez Hoyuela, Maria Moran, Alberto Blazquez, Rosa Pello, Lorena Marin Buera, Toni Gabaldon, Juan Jose Garcia Peñas, Miguel A Martín, Joaquin Arenas, Cristina Ugalde
Published 2010-09-01

The genome of the generalist plant pathogen Fusarium avenaceum is enriched with genes involved in redox, signaling and secondary metabolism.

by Erik Lysøe, Linda J Harris, Sean Walkowiak, Rajagopal Subramaniam, Hege H Divon, Even S Riiser, Carlos Llorens, Toni Gabaldón, H Corby Kistler, Wilfried Jonkers, Anna-Karin Kolseth, Kristian F Nielsen, Ulf Thrane, Rasmus J N Frandsen
Published 2014-01-01

Oral microbiome in down syndrome and its implications on oral health

by Jesse R. Willis, Susana Iraola-Guzmán, Ester Saus, Ewa Ksiezopolska, Luca Cozzuto, Luis A. Bejarano, Nuria Andreu-Somavilla, Miriam Alloza-Trabado, Anna Puig-Sola, Andrea Blanco, Elisabetta Broglio, Carlo Carolis, Jochen Hecht, Julia Ponomarenko, Toni Gabaldón
Published 2021-01-01

Citizen-science based study of the oral microbiome in Cystic fibrosis and matched controls reveals major differences in diversity and abundance of bacterial and fungal species

by Jesse R. Willis, Ester Saus, Susana Iraola-Guzmán, Elena Cabello-Yeves, Ewa Ksiezopolska, Luca Cozzuto, Luis A. Bejarano, Nuria Andreu-Somavilla, Miriam Alloza-Trabado, Andrea Blanco, Anna Puig-Sola, Elisabetta Broglio, Carlo Carolis, Julia Ponomarenko, Jochen Hecht, Toni Gabaldón
Published 2021-01-01

Gene expansion shapes genome architecture in the human pathogen Lichtheimia corymbifera: an evolutionary genomics analysis in the ancient terrestrial mucorales (Mucoromycotina).

by Volker U Schwartze, Sascha Winter, Ekaterina Shelest, Marina Marcet-Houben, Fabian Horn, Stefanie Wehner, Jörg Linde, Vito Valiante, Michael Sammeth, Konstantin Riege, Minou Nowrousian, Kerstin Kaerger, Ilse D Jacobsen, Manja Marz, Axel A Brakhage, Toni Gabaldón, Sebastian Böcker, Kerstin Voigt
Published 2014-08-01

Correction: Gene Expansion Shapes Genome Architecture in the Human Pathogen Lichtheimia corymbifera: An Evolutionary Genomics Analysis in the Ancient Terrestrial Mucorales (Mucorom...

by Volker U Schwartze, Sascha Winter, Ekaterina Shelest, Marina Marcet-Houben, Fabian Horn, Stefanie Wehner, Jörg Linde, Vito Valiante, Michael Sammeth, Konstantin Riege, Minou Nowrousian, Kerstin Kaerger, Ilse D Jacobsen, Manja Marz, Axel A Brakhage, Toni Gabaldón, Sebastian Böcker, Kerstin Voigt
Published 2016-12-01

Massive gene presence-absence variation shapes an open pan-genome in the Mediterranean mussel

by Marco Gerdol, Rebeca Moreira, Fernando Cruz, Jessica Gómez-Garrido, Anna Vlasova, Umberto Rosani, Paola Venier, Miguel A. Naranjo-Ortiz, Maria Murgarella, Samuele Greco, Pablo Balseiro, André Corvelo, Leonor Frias, Marta Gut, Toni Gabaldón, Alberto Pallavicini, Carlos Canchaya, Beatriz Novoa, Tyler S. Alioto, David Posada, Antonio Figueras
Published 2020-11-01

Genomic history of the origin and domestication of common bean unveils its closest sister species

by Martha Rendón-Anaya, Josaphat M. Montero-Vargas, Soledad Saburido-Álvarez, Anna Vlasova, Salvador Capella-Gutierrez, José Juan Ordaz-Ortiz, O. Mario Aguilar, Rosana P. Vianello-Brondani, Marta Santalla, Luis Delaye, Toni Gabaldón, Paul Gepts, Robert Winkler, Roderic Guigó, Alfonso Delgado-Salinas, Alfredo Herrera-Estrella
Published 2017-03-01

Citizen science charts two major “stomatotypes” in the oral microbiome of adolescents and reveals links with habits and drinking water composition

by Jesse R. Willis, Pedro González-Torres, Alexandros A. Pittis, Luis A. Bejarano, Luca Cozzuto, Nuria Andreu-Somavilla, Miriam Alloza-Trabado, Antonia Valentín, Ewa Ksiezopolska, Carlos Company, Harris Onywera, Magda Montfort, Antonio Hermoso, Susana Iraola-Guzmán, Ester Saus, Annick Labeeuw, Carlo Carolis, Jochen Hecht, Julia Ponomarenko, Toni Gabaldón
Published 2018-12-01

Ancient dispersal of the human fungal pathogen Cryptococcus gattii from the Amazon rainforest.

by Ferry Hagen, Paulo C Ceresini, Itzhack Polacheck, Hansong Ma, Filip van Nieuwerburgh, Toni Gabaldón, Sarah Kagan, E Rhiannon Pursall, Hans L Hoogveld, Leo J J van Iersel, Gunnar W Klau, Steven M Kelk, Leen Stougie, Karen H Bartlett, Kerstin Voelz, Leszek P Pryszcz, Elizabeth Castañeda, Marcia Lazera, Wieland Meyer, Dieter Deforce, Jacques F Meis, Robin C May, Corné H W Klaassen, Teun Boekhout
Published 2013-01-01

Systematic phenotyping of a large-scale Candida glabrata deletion collection reveals novel antifungal tolerance genes.

by Tobias Schwarzmüller, Biao Ma, Ekkehard Hiller, Fabian Istel, Michael Tscherner, Sascha Brunke, Lauren Ames, Arnaud Firon, Brian Green, Vitor Cabral, Marina Marcet-Houben, Ilse D Jacobsen, Jessica Quintin, Katja Seider, Ingrid Frohner, Walter Glaser, Helmut Jungwirth, Sophie Bachellier-Bassi, Murielle Chauvel, Ute Zeidler, Dominique Ferrandon, Toni Gabaldón, Bernhard Hube, Christophe d'Enfert, Steffen Rupp, Brendan Cormack, Ken Haynes, Karl Kuchler
Published 2014-06-01

Functional Characterization of Clinical Isolates of the Opportunistic Fungal Pathogen Aspergillus nidulans

by Rafael Wesley Bastos, Clara Valero, Lilian Pereira Silva, Taylor Schoen, Milton Drott, Verônica Brauer, Rafael Silva-Rocha, Abigail Lind, Jacob L. Steenwyk, Antonis Rokas, Fernando Rodrigues, Agustin Resendiz-Sharpe, Katrien Lagrou, Marina Marcet-Houben, Toni Gabaldón, Erin McDonnell, Ian Reid, Adrian Tsang, Berl R. Oakley, Flávio Vieira Loures, Fausto Almeida, Anna Huttenlocher, Nancy P. Keller, Laure Nicolas Annick Ries, Gustavo H. Goldman
Published 2020-04-01

Gene flow contributes to diversification of the major fungal pathogen Candida albicans

by Jeanne Ropars, Corinne Maufrais, Dorothée Diogo, Marina Marcet-Houben, Aurélie Perin, Natacha Sertour, Kevin Mosca, Emmanuelle Permal, Guillaume Laval, Christiane Bouchier, Laurence Ma, Katja Schwartz, Kerstin Voelz, Robin C. May, Julie Poulain, Christophe Battail, Patrick Wincker, Andrew M. Borman, Anuradha Chowdhary, Shangrong Fan, Soo Hyun Kim, Patrice Le Pape, Orazio Romeo, Jong Hee Shin, Toni Gabaldon, Gavin Sherlock, Marie-Elisabeth Bougnoux, Christophe d’Enfert
Published 2018-06-01

Erratum to: Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant species

by Thomas C. Mathers, Yazhou Chen, Gemy Kaithakottil, Fabrice Legeai, Sam T. Mugford, Patrice Baa-Puyoulet, Anthony Bretaudeau, Bernardo Clavijo, Stefano Colella, Olivier Collin, Tamas Dalmay, Thomas Derrien, Honglin Feng, Toni Gabaldón, Anna Jordan, Irene Julca, Graeme J. Kettles, Krissana Kowitwanich, Dominique Lavenier, Paolo Lenzi, Sara Lopez-Gomollon, Damian Loska, Daniel Mapleson, Florian Maumus, Simon Moxon, Daniel R. G. Price, Akiko Sugio, Manuella van Munster, Marilyne Uzest, Darren Waite, Georg Jander, Denis Tagu, Alex C. C. Wilson, Cock van Oosterhout, David Swarbreck, Saskia A. Hogenhout
Published 2017-04-01