Fine-Scale Resolution of Runs of Homozygosity Reveal Patterns of Inbreeding and Substantial Overlap with Recessive Disease Genotypes in Domestic Dogs

by Aaron J. Sams, Adam R. Boyko
Published 2019-01-01

Examination of the efficacy of small genetic panels in genomic conservation of companion animal populations

by Aaron J. Sams, Brett Ford, Adam Gardner, Adam R. Boyko
Published 2020-12-01

Genetic Mapping of Novel Loci Affecting Canine Blood Phenotypes.

by Michelle E White, Jessica J Hayward, Tracy Stokol, Adam R Boyko
Published 2015-01-01

A Pedigree-Based Map of Recombination in the Domestic Dog Genome

by Christopher L. Campbell, Claude Bhérer, Bernice E. Morrow, Adam R. Boyko, Adam Auton
Published 2016-11-01

Direct-to-consumer DNA testing of 6,000 dogs reveals 98.6-kb duplication associated with blue eyes and heterochromia in Siberian Huskies.

by Petra E Deane-Coe, Erin T Chu, Andrea Slavney, Adam R Boyko, Aaron J Sams
Published 2018-10-01

Elucidating biogeographical patterns in Australian native canids using genome wide SNPs.

by Kylie M Cairns, Laura M Shannon, Janice Koler-Matznick, J William O Ballard, Adam R Boyko
Published 2018-01-01

Levels and patterns of nucleotide variation in domestication QTL regions on rice chromosome 3 suggest lineage-specific selection.

by Xianfa Xie, Jeanmaire Molina, Ryan Hernandez, Andy Reynolds, Adam R Boyko, Carlos D Bustamante, Michael D Purugganan
Published 2011-01-01

Five genetic variants explain over 70% of hair coat pheomelanin intensity variation in purebred and mixed breed domestic dogs.

by Andrea J Slavney, Takeshi Kawakami, Meghan K Jensen, Thomas C Nelson, Aaron J Sams, Adam R Boyko
Published 2021-01-01

Comparison of village dog and wolf genomes highlights the role of the neural crest in dog domestication

by Amanda L. Pendleton, Feichen Shen, Angela M. Taravella, Sarah Emery, Krishna R. Veeramah, Adam R. Boyko, Jeffrey M. Kidd
Published 2018-06-01

Genetic mapping of distal femoral, stifle, and tibial radiographic morphology in dogs with cranial cruciate ligament disease.

by Eleni Healey, Rachel J Murphy, Jessica J Hayward, Marta Castelhano, Adam R Boyko, Kei Hayashi, Ursula Krotscheck, Rory J Todhunter
Published 2019-01-01

A genome-wide association study of deafness in three canine breeds.

by Jessica J Hayward, Maria Kelly-Smith, Adam R Boyko, Louise Burmeister, Luisa De Risio, Cathryn Mellersh, Julia Freeman, George M Strain
Published 2020-01-01

R-locus for roaned coat is associated with a tandem duplication in an intronic region of USH2A in dogs and also contributes to Dalmatian spotting.

by Takeshi Kawakami, Meghan K Jensen, Andrea Slavney, Petra E Deane, Ausra Milano, Vandana Raghavan, Brett Ford, Erin T Chu, Aaron J Sams, Adam R Boyko
Published 2021-01-01

A novel iterative mixed model to remap three complex orthopedic traits in dogs.

by Meng Huang, Jessica J Hayward, Elizabeth Corey, Susan J Garrison, Gabriela R Wagner, Ursula Krotscheck, Kei Hayashi, Peter A Schweitzer, George Lust, Adam R Boyko, Rory J Todhunter
Published 2017-01-01

Evolutionary processes acting on candidate cis-regulatory regions in humans inferred from patterns of polymorphism and divergence.

by Dara G Torgerson, Adam R Boyko, Ryan D Hernandez, Amit Indap, Xiaolan Hu, Thomas J White, John J Sninsky, Michele Cargill, Mark D Adams, Carlos D Bustamante, Andrew G Clark
Published 2009-08-01

Genetic recombination is targeted towards gene promoter regions in dogs.

by Adam Auton, Ying Rui Li, Jeffrey Kidd, Kyle Oliveira, Julie Nadel, J Kim Holloway, Jessica J Hayward, Paula E Cohen, John M Greally, Jun Wang, Jun Wang, Carlos D Bustamante, Adam R Boyko
Published 2013-01-01

Imputation of canine genotype array data using 365 whole-genome sequences improves power of genome-wide association studies.

by Jessica J Hayward, Michelle E White, Michael Boyle, Laura M Shannon, Margret L Casal, Marta G Castelhano, Sharon A Center, Vicki N Meyers-Wallen, Kenneth W Simpson, Nathan B Sutter, Rory J Todhunter, Adam R Boyko
Published 2019-09-01

XX Disorder of Sex Development is associated with an insertion on chromosome 9 and downregulation of RSPO1 in dogs (Canis lupus familiaris).

by Vicki N Meyers-Wallen, Adam R Boyko, Charles G Danko, Jennifer K Grenier, Jason G Mezey, Jessica J Hayward, Laura M Shannon, Chuan Gao, Afrah Shafquat, Edward J Rice, Shashikant Pujar, Stefanie Eggers, Thomas Ohnesorg, Andrew H Sinclair
Published 2017-01-01

Assessing the evolutionary impact of amino acid mutations in the human genome.

by Adam R Boyko, Scott H Williamson, Amit R Indap, Jeremiah D Degenhardt, Ryan D Hernandez, Kirk E Lohmueller, Mark D Adams, Steffen Schmidt, John J Sninsky, Shamil R Sunyaev, Thomas J White, Rasmus Nielsen, Andrew G Clark, Carlos D Bustamante
Published 2008-05-01

Variation of BMP3 contributes to dog breed skull diversity.

by Jeffrey J Schoenebeck, Sarah A Hutchinson, Alexandra Byers, Holly C Beale, Blake Carrington, Daniel L Faden, Maud Rimbault, Brennan Decker, Jeffrey M Kidd, Raman Sood, Adam R Boyko, John W Fondon, Robert K Wayne, Carlos D Bustamante, Brian Ciruna, Elaine A Ostrander
Published 2012-01-01

A population genetic approach to mapping neurological disorder genes using deep resequencing.

by Rachel A Myers, Ferran Casals, Julie Gauthier, Fadi F Hamdan, Jon Keebler, Adam R Boyko, Carlos D Bustamante, Amelie M Piton, Dan Spiegelman, Edouard Henrion, Martine Zilversmit, Julie Hussin, Jacklyn Quinlan, Yan Yang, Ronald G Lafrenière, Alexander R Griffing, Eric A Stone, Guy A Rouleau, Philip Awadalla
Published 2011-02-01