MetaCell: analysis of single-cell RNA-seq data using K-nn graph partitions

by Yael Baran, Akhiad Bercovich, Arnau Sebe-Pedros, Yaniv Lubling, Amir Giladi, Elad Chomsky, Zohar Meir, Michael Hoichman, Aviezer Lifshitz, Amos Tanay
Published 2019-10-01

DC Respond to Cognate T Cell Interaction in the Antigen-Challenged Lymph Node

by Caterina Curato, Biana Bernshtein, Eva Zupancič, Almut Dufner, Diego Jaitin, Amir Giladi, Eyal David, Louise Chappell-Maor, Dena Leshkowitz, Klaus-Peter Knobeloch, Ido Amit, Helena F. Florindo, Steffen Jung
Published 2019-04-01

Differences in Cell Cycle Status Underlie Transcriptional Heterogeneity in the HSC Compartment

by Felicia Kathrine Bratt Lauridsen, Tanja Lyholm Jensen, Nicolas Rapin, Derya Aslan, Anna Sofia Wilhelmson, Sachin Pundhir, Matilda Rehn, Franziska Paul, Amir Giladi, Marie Sigurd Hasemann, Palle Serup, Ido Amit, Bo Torben Porse
Published 2018-07-01