Elucidating the Influence of Chromosomal Architecture on Transcriptional Regulation in Prokaryotes – Observing Strong Local Effects of Nucleoid Structure on Gene Regulation

by Thøger Jensen Krogh, Andre Franke, Jakob Møller-Jensen, Christoph Kaleta
Published 2020-09-01

The Impact of Oral Sodium Chloride Supplementation on Thrive and the Intestinal Microbiome in Neonates With Small Bowel Ostomies: A Prospective Cohort Study

by Tina Trautmann, Corinna Bang, Andre Franke, Deirdre Vincent, Konrad Reinshagen, Michael Boettcher
Published 2020-07-01

Amino acid encoding for deep learning applications

by Hesham ElAbd, Yana Bromberg, Adrienne Hoarfrost, Tobias Lenz, Andre Franke, Mareike Wendorff
Published 2020-06-01

Differential genetic and functional background in inflammatory bowel disease phenotypes of a Greek population: a systems bioinformatics approach

by Maria Gazouli, Nikolas Dovrolis, Andre Franke, George M. Spyrou, Leonardo A. Sechi, George Kolios
Published 2019-06-01

Chloroflexi Dominate the Deep-Sea Golf Ball Sponges Craniella zetlandica and Craniella infrequens Throughout Different Life Stages

by Kathrin Busch, Erik Wurz, Hans Tore Rapp, Kristina Bayer, Andre Franke, Ute Hentschel, Ute Hentschel
Published 2020-08-01

Identifying Crohn’s disease signal from variome analysis

by Yanran Wang, Maximilian Miller, Yuri Astrakhan, Britt-Sabina Petersen, Stefan Schreiber, Andre Franke, Yana Bromberg
Published 2019-09-01

Current Developments of Clinical Sequencing and the Clinical Utility of Polygenic Risk Scores in Inflammatory Diseases

by Matthias Hübenthal, Britt-Sabina Löscher, Jeanette Erdmann, Andre Franke, Damian Gola, Inke R. König, Hila Emmert
Published 2021-01-01

Overview of methodologies for T-cell receptor repertoire analysis

by Elisa Rosati, C Marie Dowds, Evaggelia Liaskou, Eva Kristine Klemsdal Henriksen, Tom H Karlsen, Andre Franke
Published 2017-07-01

Investigation of complement component C4 copy number variation in human longevity.

by Friederike Flachsbart, Amke Caliebe, Femke-Anouska Heinsen, Tom Hemming-Karlsen, Stefan Schreiber, Andre Franke, Almut Nebel
Published 2014-01-01

Serum anti-glycan-antibodies in relatives of patients with inflammatory bowel disease.

by Florian Kamm, Ulrike Strauch, Frauke Degenhardt, Rocio Lopez, Claudia Kunst, Gerhard Rogler, Andre Franke, Frank Klebl, Florian Rieders
Published 2018-01-01

Transcriptomic Analysis of Intestinal Tissues from Two 90-Day Feeding Studies in Rats Using Genetically Modified MON810 Maize Varieties

by Jutta Sharbati, Marc Bohmer, Nils Bohmer, Andreas Keller, Christina Backes, Andre Franke, Pablo Steinberg, Dagmar Zeljenková, Ralf Einspanier
Published 2017-12-01

Correction: Serum anti-glycan-antibodies in relatives of patients with inflammatory bowel disease.

by Florian Kamm, Ulrike Strauch, Frauke Degenhardt, Rocio Lopez, Claudia Kunst, Gerhard Rogler, Andre Franke, Frank Klebl, Florian Rieder
Published 2018-01-01

A post-GWAS analysis of predicted regulatory variants and tuberculosis susceptibility.

by Caitlin Uren, Brenna M Henn, Andre Franke, Michael Wittig, Paul D van Helden, Eileen G Hoal, Marlo Möller
Published 2017-01-01

Intestinal protozoan infections shape fecal bacterial microbiota in children from Guinea-Bissau.

by Sebastian von Huth, Louise B Thingholm, Poul-Erik Kofoed, Corinna Bang, Malte C Rühlemann, Andre Franke, Uffe Holmskov
Published 2021-03-01

Sparse Modeling Reveals miRNA Signatures for Diagnostics of Inflammatory Bowel Disease.

by Matthias Hübenthal, Georg Hemmrich-Stanisak, Frauke Degenhardt, Silke Szymczak, Zhipei Du, Abdou Elsharawy, Andreas Keller, Stefan Schreiber, Andre Franke
Published 2015-01-01

The Influence of the Autoimmunity-Associated Ancestral HLA Haplotype AH8.1 on the Human Gut Microbiota: A Cross-Sectional Study.

by Johannes R Hov, Huanzi Zhong, Bingcai Qin, Jarl Andreas Anmarkrud, Kristian Holm, Andre Franke, Benedicte A Lie, Tom H Karlsen
Published 2015-01-01

Rapid response of stage IV colorectal cancer with APC/TP53/KRAS mutations to FOLFIRI and Bevacizumab combination chemotherapy: a case report of use of liquid biopsy

by Alexander Hendricks, Philip Rosenstiel, Sebastian Hinz, Greta Burmeister, Christoph Röcken, Kathrin Boersch, Clemens Schafmayer, Thomas Becker, Andre Franke, Michael Forster
Published 2020-01-01

Immunopeptidomics toolkit library (IPTK): a python-based modular toolbox for analyzing immunopeptidomics data

by Hesham ElAbd, Frauke Degenhardt, Tomas Koudelka, Ann-Kristin Kamps, Andreas Tholey, Petra Bacher, Tobias L. Lenz, Andre Franke, Mareike Wendorff
Published 2021-08-01

Intestinal DMBT1 expression is modulated by Crohn's disease-associated IL23R variants and by a DMBT1 variant which influences binding of the transcription factors CREB1 and ATF-2.

by Julia Diegelmann, Darina Czamara, Emmanuelle Le Bras, Eva Zimmermann, Torsten Olszak, Andrea Bedynek, Burkhard Göke, Andre Franke, Jürgen Glas, Stephan Brand
Published 2013-01-01

Identification of long intergenic non-coding RNAs (lincRNAs) deregulated in gastrointestinal stromal tumors (GISTs).

by Ugne Gyvyte, Juozas Kupcinskas, Simonas Juzenas, Ruta Inciuraite, Lina Poskiene, Violeta Salteniene, Alexander Link, Matteo Fassan, Andre Franke, Limas Kupcinskas, Jurgita Skieceviciene
Published 2018-01-01