Amino acid encoding for deep learning applications

by Hesham ElAbd, Yana Bromberg, Adrienne Hoarfrost, Tobias Lenz, Andre Franke, Mareike Wendorff
Published 2020-06-01

Immunopeptidomics toolkit library (IPTK): a python-based modular toolbox for analyzing immunopeptidomics data

by Hesham ElAbd, Frauke Degenhardt, Tomas Koudelka, Ann-Kristin Kamps, Andreas Tholey, Petra Bacher, Tobias L. Lenz, Andre Franke, Mareike Wendorff
Published 2021-08-01

Unbiased Characterization of Peptide-HLA Class II Interactions Based on Large-Scale Peptide Microarrays; Assessment of the Impact on HLA Class II Ligand and Epitope Prediction

by Mareike Wendorff, Heli M. Garcia Alvarez, Thomas Østerbye, Hesham ElAbd, Elisa Rosati, Frauke Degenhardt, Søren Buus, Andre Franke, Morten Nielsen, Morten Nielsen
Published 2020-08-01