Quasimetagenomic source tracking of Listeria monocytogenes from naturally contaminated ice cream

by Andrea Ottesen, Padmini Ramachandran, Yi Chen, Eric Brown, Elizabeth Reed, Errol Strain
Published 2020-01-01

Pyrosequencing of bacterial symbionts within Axinella corrugata sponges: diversity and seasonal variability.

by James R White, Jignasa Patel, Andrea Ottesen, Gabriela Arce, Patricia Blackwelder, Jose V Lopez
Published 2012-01-01

Microbiomes in Ground Water and Alternative Irrigation Water, and Spinach Microbiomes Impacted by Irrigation with Different Types of Water

by Ganyu Gu, Hsin-Bai Yin, Andrea Ottesen, Samantha Bolten, Jitendra Patel, Steve Rideout, Xiangwu Nou
Published 2019-06-01

Metagenomics of pasteurized and unpasteurized gouda cheese using targeted 16S rDNA sequencing

by Joelle K. Salazar, Christina K. Carstens, Padmini Ramachandran, Arlette G. Shazer, Sartaj S. Narula, Elizabeth Reed, Andrea Ottesen, Kristin M. Schill
Published 2018-11-01

An evaluation of alternative methods for constructing phylogenies from whole genome sequence data: a case study with Salmonella

by James B. Pettengill, Yan Luo, Steven Davis, Yi Chen, Narjol Gonzalez-Escalona, Andrea Ottesen, Hugh Rand, Marc W. Allard, Errol Strain
Published 2014-10-01

Microbiomes Associated With Foods From Plant and Animal Sources

by Karen G. Jarvis, Ninalynn Daquigan, James R. White, Paul M. Morin, Laura M. Howard, Julia E. Manetas, Andrea Ottesen, Padmini Ramachandran, Christopher J. Grim
Published 2018-10-01

Evaluating the accuracy of Listeria monocytogenes assemblies from quasimetagenomic samples using long and short reads

by Seth Commichaux, Kiran Javkar, Padmini Ramachandran, Niranjan Nagarajan, Denis Bertrand, Yi Chen, Elizabeth Reed, Narjol Gonzalez-Escalona, Errol Strain, Hugh Rand, Mihai Pop, Andrea Ottesen
Published 2021-05-01

Using full chloroplast genomes of ‘red’ and ‘yellow’ Bixa orellana (achiote) for kmer based identification and phylogenetic inference

by Jorge Villacrés-Vallejo, José Aranda-Ventura, Anna Wallis, Robin Cagle, Sara M. Handy, Jeffery Davis, Elizabeth Reed, Shu Zhang, Errol Strain, Monica Pava-Ripoll, David Erickson, Padmini Ramachandran, Andrea Ottesen
Published 2020-08-01