Genome-wide analysis of the "cut-and-paste" transposons of grapevine.

by Andrej Benjak, Astrid Forneck, Josep M Casacuberta
Published 2008-09-01

EspL is essential for virulence and stabilizes EspE, EspF and EspH levels in Mycobacterium tuberculosis.

by Claudia Sala, Nina T Odermatt, Paloma Soler-Arnedo, Muhammet F Gülen, Sofia von Schultz, Andrej Benjak, Stewart T Cole
Published 2018-12-01

The PhoP-dependent ncRNA Mcr7 modulates the TAT secretion system in Mycobacterium tuberculosis.

by Luis Solans, Jesús Gonzalo-Asensio, Claudia Sala, Andrej Benjak, Swapna Uplekar, Jacques Rougemont, Christophe Guilhot, Wladimir Malaga, Carlos Martín, Stewart T Cole
Published 2014-05-01

Insights from the Genome Sequence of Mycobacterium lepraemurium: Massive Gene Decay and Reductive Evolution

by Andrej Benjak, Tanvi P. Honap, Charlotte Avanzi, Enrique Becerril-Villanueva, Iris Estrada-García, Oscar Rojas-Espinosa, Anne C. Stone, Stewart T. Cole, Roland Brosch, Christina L. Stallings
Published 2017-10-01

Arylvinylpiperazine Amides, a New Class of Potent Inhibitors Targeting QcrB of Mycobacterium tuberculosis

by Caroline S. Foo, Andréanne Lupien, Maryline Kienle, Anthony Vocat, Andrej Benjak, Raphael Sommer, Dirk A. Lamprecht, Adrie J. C. Steyn, Kevin Pethe, Jérémie Piton, Karl-Heinz Altmann, Stewart T. Cole
Published 2018-10-01

New 2-Ethylthio-4-methylaminoquinazoline derivatives inhibiting two subunits of cytochrome bc1 in Mycobacterium tuberculosis.

by Andréanne Lupien, Caroline Shi-Yan Foo, Svetlana Savina, Anthony Vocat, Jérémie Piton, Natalia Monakhova, Andrej Benjak, Dirk A Lamprecht, Adrie J C Steyn, Kevin Pethe, Vadim A Makarov, Stewart T Cole
Published 2020-01-01

Genomic Characterization of Mycobacterium leprae to Explore Transmission Patterns Identifies New Subtype in Bangladesh

by Maria Tió-Coma, Charlotte Avanzi, Els M. Verhard, Louise Pierneef, Anouk van Hooij, Andrej Benjak, Johan Chandra Roy, Marufa Khatun, Khorshed Alam, Paul Corstjens, Stewart T. Cole, Stewart T. Cole, Jan Hendrik Richardus, Annemieke Geluk
Published 2020-06-01

Multicenter analysis of sputum microbiota in tuberculosis patients.

by Claudia Sala, Andrej Benjak, Delia Goletti, Sayera Banu, Jesica Mazza-Stadler, Katia Jaton, Philippe Busso, Sille Remm, Marion Leleu, Jacques Rougemont, Fabrizio Palmieri, Gilda Cuzzi, Ornella Butera, Valentina Vanini, Senjuti Kabir, S M Mazidur Rahman, Laurent Nicod, Stewart T Cole
Published 2020-01-01

Elimination of PknL and MSMEG_4242 in Mycobacterium smegmatis alters the character of the outer cell envelope and selects for mutations in Lsr2

by Estalina Báez-Ramírez, Luis Querales, Carlos Andres Aranaga, Gustavo López, Elba Guerrero, Laurent Kremer, Séverine Carrère-Kremer, Albertus Viljoen, Mamadou Daffé, Françoise Laval, Stewart T. Cole, Andrej Benjak, Pedro Alzari, Gwenaëlle André-Leroux, William R. Jacobs, Jr., Catherine Vilcheze, Howard E. Takiff
Published 2021-12-01

Whole genome sequencing distinguishes between relapse and reinfection in recurrent leprosy cases.

by Mariane M A Stefani, Charlotte Avanzi, Samira Bührer-Sékula, Andrej Benjak, Chloé Loiseau, Pushpendra Singh, Maria A A Pontes, Heitor S Gonçalves, Emerith M Hungria, Philippe Busso, Jérémie Piton, Maria I S Silveira, Rossilene Cruz, Antônio Schetinni, Maurício B Costa, Marcos C L Virmond, Suzana M Diorio, Ida M F Dias-Baptista, Patricia S Rosa, Masanori Matsuoka, Maria L F Penna, Stewart T Cole, Gerson O Penna
Published 2017-06-01

Patient-derived xenografts and organoids model therapy response in prostate cancer

by Sofia Karkampouna, Federico La Manna, Andrej Benjak, Mirjam Kiener, Marta De Menna, Eugenio Zoni, Joël Grosjean, Irena Klima, Andrea Garofoli, Marco Bolis, Arianna Vallerga, Jean-Philippe Theurillat, Maria R. De Filippo, Vera Genitsch, David Keller, Tijmen H. Booij, Christian U. Stirnimann, Kenneth Eng, Andrea Sboner, Charlotte K. Y. Ng, Salvatore Piscuoglio, Peter C. Gray, Martin Spahn, Mark A. Rubin, George N. Thalmann, Marianna Kruithof-de Julio
Published 2021-02-01

Ancient genomes reveal a high diversity of Mycobacterium leprae in medieval Europe.

by Verena J Schuenemann, Charlotte Avanzi, Ben Krause-Kyora, Alexander Seitz, Alexander Herbig, Sarah Inskip, Marion Bonazzi, Ella Reiter, Christian Urban, Dorthe Dangvard Pedersen, G Michael Taylor, Pushpendra Singh, Graham R Stewart, Petr Velemínský, Jakub Likovsky, Antónia Marcsik, Erika Molnár, György Pálfi, Valentina Mariotti, Alessandro Riga, M Giovanna Belcastro, Jesper L Boldsen, Almut Nebel, Simon Mays, Helen D Donoghue, Sonia Zakrzewski, Andrej Benjak, Kay Nieselt, Stewart T Cole, Johannes Krause
Published 2018-05-01

Population Genomics of Mycobacterium leprae Reveals a New Genotype in Madagascar and the Comoros

by Charlotte Avanzi, Charlotte Avanzi, Charlotte Avanzi, Emmanuel Lécorché, Emmanuel Lécorché, Fetra Angelot Rakotomalala, Andrej Benjak, Fahafahantsoa Rapelanoro Rabenja, Lala S. Ramarozatovo, Lala S. Ramarozatovo, Bertrand Cauchoix, Mala Rakoto-Andrianarivelo, Maria Tió-Coma, Thyago Leal-Calvo, Philippe Busso, Stefanie Boy-Röttger, Aurélie Chauffour, Tahinamandrato Rasamoelina, Aina Andrianarison, Fandresena Sendrasoa, John S. Spencer, Pushpendra Singh, Digambar Ramchandra Dashatwar, Rahul Narang, Jean-Luc Berland, Jean-Luc Berland, Vincent Jarlier, Vincent Jarlier, Claudio G. Salgado, Milton O. Moraes, Annemieke Geluk, Andriamira Randrianantoandro, Emmanuelle Cambau, Emmanuelle Cambau, Stewart T. Cole, Stewart T. Cole
Published 2020-05-01

Phylogenomics and antimicrobial resistance of the leprosy bacillus Mycobacterium leprae

by Andrej Benjak, Charlotte Avanzi, Pushpendra Singh, Chloé Loiseau, Selfu Girma, Philippe Busso, Amanda N. Brum Fontes, Yuji Miyamoto, Masako Namisato, Kidist Bobosha, Claudio G. Salgado, Moisés B. da Silva, Raquel C. Bouth, Marco A. C. Frade, Fred Bernardes Filho, Josafá G. Barreto, José A. C. Nery, Samira Bührer-Sékula, Andréanne Lupien, Abdul R. Al-Samie, Yasin Al-Qubati, Abdul S. Alkubati, Gisela Bretzel, Lucio Vera-Cabrera, Fatoumata Sakho, Christian R. Johnson, Mamoudou Kodio, Abdoulaye Fomba, Samba O. Sow, Moussa Gado, Ousmane Konaté, Mariane M. A. Stefani, Gerson O. Penna, Philip N. Suffys, Euzenir Nunes Sarno, Milton O. Moraes, Patricia S. Rosa, Ida M. F. Dias Baptista, John S. Spencer, Abraham Aseffa, Masanori Matsuoka, Masanori Kai, Stewart T. Cole
Published 2018-01-01