Family-specific genotype arrays increase the accuracy of pedigree-based imputation at very low marker densities

by Andrew Whalen, Gregor Gorjanc, John M. Hickey
Published 2019-06-01

Assessment of the performance of hidden Markov models for imputation in animal breeding

by Andrew Whalen, Gregor Gorjanc, Roger Ros-Freixedes, John M. Hickey
Published 2018-09-01

Evaluation of sequencing strategies for whole-genome imputation with hybrid peeling

by Roger Ros-Freixedes, Andrew Whalen, Gregor Gorjanc, Alan J. Mileham, John M. Hickey
Published 2020-04-01

Hybrid peeling for fast and accurate calling, phasing, and imputation with sequence data of any coverage in pedigrees

by Andrew Whalen, Roger Ros-Freixedes, David L. Wilson, Gregor Gorjanc, John M. Hickey
Published 2018-12-01

Extending long-range phasing and haplotype library imputation algorithms to large and heterogeneous datasets

by Daniel Money, David Wilson, Janez Jenko, Andrew Whalen, Steve Thorn, Gregor Gorjanc, John M. Hickey
Published 2020-07-01

Accuracy of whole-genome sequence imputation using hybrid peeling in large pedigreed livestock populations

by Roger Ros-Freixedes, Andrew Whalen, Ching-Yi Chen, Gregor Gorjanc, William O. Herring, Alan J. Mileham, John M. Hickey
Published 2020-04-01

Association of vitamin A deficiency with early childhood stunting in Uganda: A population-based cross-sectional study.

by Paddy Ssentongo, Djibril M Ba, Anna E Ssentongo, Claudio Fronterre, Andrew Whalen, Yanxu Yang, Jessica E Ericson, Vernon M Chinchilli
Published 2020-01-01

Genetic variation in recombination rate in the pig

by Martin Johnsson, Andrew Whalen, Roger Ros-Freixedes, Gregor Gorjanc, Ching-Yi Chen, William O. Herring, Dirk-Jan de Koning, John M. Hickey
Published 2021-06-01

A genome-wide association analysis for body weight at 35 days measured on 137,343 broiler chickens

by Christos Dadousis, Adriana Somavilla, Joanna J. Ilska, Martin Johnsson, Lorena Batista, Richard J. Mellanby, Denis Headon, Paolo Gottardo, Andrew Whalen, David Wilson, Ian C. Dunn, Gregor Gorjanc, Andreas Kranis, John M. Hickey
Published 2021-09-01