A case for a CUG-initiated coding sequence overlapping torovirus ORF1a and encoding a novel 30 kDa product

by Atkins John F, Firth Andrew E
Published 2009-09-01

Evidence for a novel coding sequence overlapping the 5'-terminal ~90 codons of the Gill-associated and Yellow head okavirus envelope glycoprotein gene

by Atkins John F, Firth Andrew E
Published 2009-12-01

Bioinformatic analysis suggests that the Cypovirus 1 major core protein cistron harbours an overlapping gene

by Atkins John F, Firth Andrew E
Published 2008-05-01

Analysis of the coding potential of the partially overlapping 3' ORF in segment 5 of the plant fijiviruses

by Atkins John F, Firth Andrew E
Published 2009-03-01

Candidates in Astroviruses, Seadornaviruses, Cytorhabdoviruses and Coronaviruses for +1 frame overlapping genes accessed by leaky scanning

by Atkins John F, Firth Andrew E
Published 2010-01-01

A conserved predicted pseudoknot in the NS2A-encoding sequence of West Nile and Japanese encephalitis flaviviruses suggests NS1' may derive from ribosomal frameshifting

by Atkins John F, Firth Andrew E
Published 2009-02-01

Bioinformatic evidence for a stem-loop structure 5'-adjacent to the IGR-IRES and for an overlapping gene in the bee paralysis dicistroviruses

by Jan Eric, Wang Qing S, Firth Andrew E, Atkins John F
Published 2009-11-01

Ornithine decarboxylase antizyme finder (OAF): Fast and reliable detection of antizymes with frameshifts in mRNAs

by Atkins John F, Ivanov Ivaylo P, Bekaert Michaël, Baranov Pavel V
Published 2008-04-01

Discovery of frameshifting in Alphavirus 6K resolves a 20-year enigma

by Fleeton Marina N, Chung Betty YW, Firth Andrew E, Atkins John F
Published 2008-09-01

Diverse bacterial genomes encode an operon of two genes, one of which is an unusual class-I release factor that potentially recognizes atypical mRNA signals other than normal stop...

by Baranov Pavel V, Vestergaard Bente, Hamelryck Thomas, Gesteland Raymond F, Nyborg Jens, Atkins John F
Published 2006-09-01

Identification of polymorphisms and balancing selection in the male infertility candidate gene, <it>ornithine decarboxylase antizyme 3</it>

by Atkins John F, Wooding Stephen P, Ivanov Ivaylo P, Christensen Greg L, Mielnik Anna, Schlegel Peter N, Carrell Douglas T
Published 2006-03-01

Identification of regions in multiple sequence alignments thermodynamically suitable for targeting by consensus oligonucleotides: application to HIV genome

by Matveeva Olga V, Foley Brian T, Nemtsov Vladimir A, Gesteland Raymond F, Matsufuji Senya, Atkins John F, Ogurtsov Aleksey Y, Shabalina Svetlana A
Published 2004-04-01