Reporting FDR analogous confidence intervals for the log fold change of differentially expressed genes

by Beißbarth Tim, Friede Tim, Jung Klaus
Published 2011-07-01

A new analysis approach of epidermal growth factor receptor pathway activation patterns provides insights into cetuximab resistance mechanisms in head and neck cancer

by von der Heyde Silvia, Beissbarth Tim
Published 2012-05-01

Sequential interim analyses of survival data in DNA microarray experiments

by Jung Klaus, Beißbarth Tim, Leha Andreas
Published 2011-04-01

GOSim – an R-package for computation of information theoretic GO similarities between terms and gene products

by Poustka Annemarie, Speer Nora, Fröhlich Holger, Beißbarth Tim
Published 2007-05-01

Deterministic Effects Propagation Networks for reconstructing protein signaling networks from multiple interventions

by Bender Christian, Arlt Dorit, Sahin Özgür, Fröhlich Holger, Beißbarth Tim
Published 2009-10-01

Large scale statistical inference of signaling pathways from RNAi and microarray data

by Poustka Annemarie, Sueltmann Holger, Fellmann Mark, Froehlich Holger, Beissbarth Tim
Published 2007-10-01

Inferring signalling networks from longitudinal data using sampling based approaches in the R-package 'ddepn'

by Korf Ulrike, Wiemann Stefan, Henjes Frauke, Heyde Silvia, Bender Christian, Beißbarth Tim
Published 2011-07-01

Extending pathways based on gene lists using InterPro domain signatures

by Wiemann Stefan, Poustka Annemarie, Arlt Dorit, Mehrle Alexander, Hahne Florian, Beissbarth Tim
Published 2008-01-01

Cohesin is required for expression of the estrogen receptor-alpha (<it>ESR1</it>) gene

by Prenzel Tanja, Kramer Frank, Bedi Upasana, Nagarajan Sankari, Beissbarth Tim, Johnsen Steven A
Published 2012-08-01

Implementierung und Erprobung eines Lernziel-basierten Evaluationssystems im Studium der Humanmedizin [Piloting an outcome-based programme evaluation tool in undergraduate medical...

by Raupach, Tobias, Schiekirka, Sarah, Münscher, Christian, Beißbarth, Tim, Himmel, Wolfgang, Burckhardt, Gerhard, Pukrop, Tobias
Published 2012-05-01

Graph based fusion of miRNA and mRNA expression data improves clinical outcome prediction in prostate cancer

by Gade Stephan, Porzelius Christine, Fälth Maria, Brase Jan C, Wuttig Daniela, Kuner Ruprecht, Binder Harald, Sültmann Holger, Beißbarth Tim
Published 2011-12-01

Impact of RNA degradation on gene expression profiling

by Opitz Lennart, Salinas-Riester Gabriela, Grade Marian, Jung Klaus, Jo Peter, Emons Georg, Ghadimi B Michael, Beißbarth Tim, Gaedcke Jochen
Published 2010-08-01

Increasing the sensitivity of reverse phase protein arrays by antibody-mediated signal amplification

by Brase Jan C, Mannsperger Heiko, Fröhlich Holger, Gade Stephan, Schmidt Christian, Wiemann Stefan, Beissbarth Tim, Schlomm Thorsten, Sültmann Holger, Korf Ulrike
Published 2010-06-01

Extrinsic and intrinsic regulation of DOR/TP53INP2 expression in mice: effects of dietary fat content, tissue type and sex in adipose and muscle tissues

by Fromm-Dornieden Carolin, Lytovchenko Oleksandr, von der Heyde Silvia, Behnke Nina, Hogl Sebastian, Berghoff Janina, Köpper Frederik, Opitz Lennart, Renne Ulla, Hoeflich Andreas, Beissbarth Tim, Brenig Bertram, Baumgartner Bernhard G
Published 2012-09-01

Systems-wide RNAi analysis of <it>CASP8AP2</it>/<it>FLASH </it>shows transcriptional deregulation of the replication-dependent histone genes and extensive effects on the transcript...

by Hummon Amanda B, Pitt Jason J, Camps Jordi, Emons Georg, Skube Susan B, Huppi Konrad, Jones Tamara L, Beissbarth Tim, Kramer Frank, Grade Marian, Difilippantonio Michael J, Ried Thomas, Caplen Natasha J
Published 2012-01-01

<it>TMPRSS2-ERG </it>-specific transcriptional modulation is associated with prostate cancer biomarkers and TGF-β signaling

by Brase Jan C, Johannes Marc, Mannsperger Heiko, Fälth Maria, Metzger Jennifer, Kacprzyk Lukasz A, Andrasiuk Tatjana, Gade Stephan, Meister Michael, Sirma Hüseyin, Sauter Guido, Simon Ronald, Schlomm Thorsten, Beißbarth Tim, Korf Ulrike, Kuner Ruprecht, Sültmann Holger
Published 2011-12-01

Integrative analysis of RUNX1 downstream pathways and target genes

by Liu Marjorie, Cannon Ping, Schütz Frédéric, Ritchie Matthew E, Carmichael Catherine, Beissbarth Tim, Buchet-Poyau Karine, Escher Robert, Simpson Ken M, Michaud Joëlle, Shen Xiaofeng, Ito Yoshiaki, Raskind Wendy H, Horwitz Marshall S, Osato Motomi, Turner David R, Speed Terence P, Kavallaris Maria, Smyth Gordon K, Scott Hamish S
Published 2008-07-01

Network Based Integration of Proteomic and Transcriptomic Data: Study of BCR and WNT11 Signaling Pathways in Cancer Cells

by Sitte, Maren
Published 2020

Graph based fusion of high-dimensional gene- and microRNA expression data

by Gade, Stephan
Published 2013

Statistical Methods to Enhance Clinical Prediction with High-Dimensional Data and Ordinal Response

by Leha, Andreas
Published 2015