A powerful HUPAN on a pan-genome study: significance and perspectives

by Yingyan Yu, Chaochun Wei
Published 2020-02-01

CDKAM: a taxonomic classification tool using discriminative k-mers and approximate matching strategies

by Van-Kien Bui, Chaochun Wei
Published 2020-10-01

PaSS: a sequencing simulator for PacBio sequencing

by Wenmin Zhang, Ben Jia, Chaochun Wei
Published 2019-06-01

MetaBinG: using GPUs to accelerate metagenomic sequence classification.

by Peng Jia, Liming Xuan, Lei Liu, Chaochun Wei
Published 2011-01-01

More than 9,000,000 unique genes in human gut bacterial community: estimating gene numbers inside a human body.

by Xing Yang, Lu Xie, Yixue Li, Chaochun Wei
Published 2009-06-01

GLAPD: Whole Genome Based LAMP Primer Design for a Set of Target Genomes

by Ben Jia, Xueling Li, Wei Liu, Changde Lu, Xiaoting Lu, Liangxiao Ma, Yuan-Yuan Li, Chaochun Wei, Chaochun Wei
Published 2019-12-01

Genetic Profiles Affect the Biological Effects of Serine on Gastric Cancer Cells

by Jun Li, Hongzhang Xue, Zhen Xiang, Shuzheng Song, Ranlin Yan, Jun Ji, Zhenggang Zhu, Chaochun Wei, Chaochun Wei, Yingyan Yu
Published 2020-07-01

NeSSM: a Next-generation Sequencing Simulator for Metagenomics.

by Ben Jia, Liming Xuan, Kaiye Cai, Zhiqiang Hu, Liangxiao Ma, Chaochun Wei
Published 2013-01-01

MetaBinG2: a fast and accurate metagenomic sequence classification system for samples with many unknown organisms

by Yuyang Qiao, Ben Jia, Zhiqiang Hu, Chen Sun, Yijin Xiang, Chaochun Wei
Published 2018-08-01

Widespread of horizontal gene transfer in the human genome

by Wenze Huang, Lillian Tsai, Yulong Li, Nan Hua, Chen Sun, Chaochun Wei
Published 2017-04-01

LAceP: lysine acetylation site prediction using logistic regression classifiers.

by Ting Hou, Guangyong Zheng, Pingyu Zhang, Jia Jia, Jing Li, Lu Xie, Chaochun Wei, Yixue Li
Published 2014-01-01

Discovery and characterization of the evolution, variation and functions of diversity-generating retroelements using thousands of genomes and metagenomes

by Fazhe Yan, Xuelin Yu, Zhongqu Duan, Jinyuan Lu, Ben Jia, Yuyang Qiao, Chen Sun, Chaochun Wei
Published 2019-07-01

Dosage compensation in the process of inactivation/reactivation during both germ cell development and early embryogenesis in mouse

by Xiaoyong Li, Zhiqiang Hu, Xuelin Yu, Chen Zhang, Binbin Ma, Lin He, Chaochun Wei, Ji Wu
Published 2017-06-01

Comparative Genomic Analysis and Characterization of Two Salmonella enterica Serovar Enteritidis Isolates From Poultry With Notably Different Survival Abilities in Egg Whites

by Yanyan Wang, Ben Jia, Xuebin Xu, Lida Zhang, Chaochun Wei, Hongyu Ou, Yan Cui, Chunlei Shi, Xianming Shi
Published 2018-09-01

HUPAN: a pan-genome analysis pipeline for human genomes

by Zhongqu Duan, Yuyang Qiao, Jinyuan Lu, Huimin Lu, Wenmin Zhang, Fazhe Yan, Chen Sun, Zhiqiang Hu, Zhen Zhang, Guichao Li, Hongzhuan Chen, Zhen Xiang, Zhenggang Zhu, Hongyu Zhao, Yingyan Yu, Chaochun Wei
Published 2019-07-01