Phylogenetic profiling: how much input data is enough?

by Nives Škunca, Christophe Dessimoz
Published 2015-01-01

Phylogenetic and functional assessment of orthologs inference projects and methods.

by Adrian M Altenhoff, Christophe Dessimoz
Published 2009-01-01

A putative origin of the insect chemosensory receptor superfamily in the last common eukaryotic ancestor

by Richard Benton, Christophe Dessimoz, David Moi
Published 2020-12-01

Quality of computationally inferred gene ontology annotations.

by Nives Skunca, Adrian Altenhoff, Christophe Dessimoz
Published 2012-05-01

Assigning confidence scores to homoeologs using fuzzy logic

by Natasha M. Glover, Adrian Altenhoff, Christophe Dessimoz
Published 2019-01-01

Scalable phylogenetic profiling using MinHash uncovers likely eukaryotic sexual reproduction genes.

by David Moi, Laurent Kilchoer, Pablo S Aguilar, Christophe Dessimoz
Published 2020-07-01

Inferring horizontal gene transfer.

by Matt Ravenhall, Nives Škunca, Florent Lassalle, Christophe Dessimoz
Published 2015-05-01

Identifying orthologs with OMA: A primer [version 1; peer review: 2 approved]

by Monique Zahn-Zabal, Christophe Dessimoz, Natasha M. Glover
Published 2020-01-01

Comparative genomics reveals contraction in olfactory receptor genes in bats

by Georgia Tsagkogeorga, Steven Müller, Christophe Dessimoz, Stephen J. Rossiter
Published 2017-03-01

Expanding the Orthologous Matrix (OMA) programmatic interfaces: REST API and the OmaDB packages for R and Python [version 2; peer review: 2 approved]

by Klara Kaleb, Alex Warwick Vesztrocy, Adrian Altenhoff, Christophe Dessimoz
Published 2019-03-01

Inferring hierarchical orthologous groups from orthologous gene pairs.

by Adrian M Altenhoff, Manuel Gil, Gaston H Gonnet, Christophe Dessimoz
Published 2013-01-01

Speeding up all-against-all protein comparisons while maintaining sensitivity by considering subsequence-level homology

by Lucas D. Wittwer, Ivana Piližota, Adrian M. Altenhoff, Christophe Dessimoz
Published 2014-10-01

Submit a Topic Page to PLOS Computational Biology and Wikipedia.

by Daniel Mietchen, Shoshana Wodak, Szymon Wasik, Natalia Szostak, Christophe Dessimoz
Published 2018-05-01

Resolving the ortholog conjecture: orthologs tend to be weakly, but significantly, more similar in function than paralogs.

by Adrian M Altenhoff, Romain A Studer, Marc Robinson-Rechavi, Christophe Dessimoz
Published 2012-01-01

A generalized Robinson-Foulds distance for labeled trees

by Samuel Briand, Christophe Dessimoz, Nadia El-Mabrouk, Manuel Lafond, Gabriela Lobinska
Published 2020-11-01

The impact of gene duplication, insertion, deletion, lateral gene transfer and sequencing error on orthology inference: a simulation study.

by Daniel A Dalquen, Adrian M Altenhoff, Gaston H Gonnet, Christophe Dessimoz
Published 2013-01-01

NGS-Based S. aureus Typing and Outbreak Analysis in Clinical Microbiology Laboratories: Lessons Learned From a Swiss-Wide Proficiency Test

by David Dylus, David Dylus, David Dylus, Trestan Pillonel, Onya Opota, Daniel Wüthrich, Daniel Wüthrich, Helena M. B. Seth-Smith, Helena M. B. Seth-Smith, Adrian Egli, Adrian Egli, Stefano Leo, Vladimir Lazarevic, Jacques Schrenzel, Sacha Laurent, Claire Bertelli, Dominique S. Blanc, Stefan Neuenschwander, Alban Ramette, Laurent Falquet, Laurent Falquet, Frank Imkamp, Peter M. Keller, Andre Kahles, Andre Kahles, Simone Oberhaensli, Simone Oberhaensli, Valérie Barbié, Christophe Dessimoz, Christophe Dessimoz, Christophe Dessimoz, Christophe Dessimoz, Christophe Dessimoz, Gilbert Greub, Aitana Lebrand
Published 2020-11-01

Approximate Bayesian computation.

by Mikael Sunnåker, Alberto Giovanni Busetto, Elina Numminen, Jukka Corander, Matthieu Foll, Christophe Dessimoz
Published 2013-01-01

A hands-on introduction to querying evolutionary relationships across multiple data sources using SPARQL [version 2; peer review: 1 approved, 2 approved with reservations]

by Ana Claudia Sima, Christophe Dessimoz, Kurt Stockinger, Monique Zahn-Zabal, Tarcisio Mendes de Farias
Published 2020-07-01

A hands-on introduction to querying evolutionary relationships across multiple data sources using SPARQL [version 1; peer review: 1 approved, 2 approved with reservations]

by Ana Claudia Sima, Christophe Dessimoz, Kurt Stockinger, Monique Zahn-Zabal, Tarcisio Mendes de Farias
Published 2019-10-01