Simulating metagenomic stable isotope probing datasets with MetaSIPSim

by Samuel E. Barnett, Daniel H. Buckley
Published 2020-01-01

Evidence from GC-TRFLP that bacterial communities in soil are lognormally distributed.

by James R Doroghazi, Daniel H Buckley
Published 2008-08-01

A comprehensive evaluation of PCR primers to amplify the nifH gene of nitrogenase.

by John Christian Gaby, Daniel H Buckley
Published 2012-01-01

The Microbial Landscape of Sea Stars and the Anatomical and Interspecies Variability of Their Microbiome

by Elliot W. Jackson, Charles Pepe-Ranney, Spencer J. Debenport, Daniel H. Buckley, Daniel H. Buckley, Ian Hewson
Published 2018-08-01

HTSSIP: An R package for analysis of high throughput sequencing data from nucleic acid stable isotope probing (SIP) experiments.

by Nicholas D Youngblut, Samuel E Barnett, Daniel H Buckley
Published 2018-01-01

Diversification of Secondary Metabolite Biosynthetic Gene Clusters Coincides with Lineage Divergence in Streptomyces

by Mallory J. Choudoir, Charles Pepe-Ranney, Daniel H. Buckley
Published 2018-02-01

Grappling with Proteus: Population level approaches to understanding microbial diversity

by Mallory J. Choudoir, Ashley N. Campbell, Daniel H. Buckley
Published 2012-09-01

SIPSim: A Modeling Toolkit to Predict Accuracy and Aid Design of DNA-SIP Experiments

by Nicholas D. Youngblut, Samuel E. Barnett, Daniel H. Buckley
Published 2018-03-01

Plant Phylogeny and Life History Shape Rhizosphere Bacterial Microbiome of Summer Annuals in an Agricultural Field

by Bryan D. Emmett, Nicholas D. Youngblut, Daniel H. Buckley, Laurie E. Drinkwater
Published 2017-12-01

Fitness Cost of Aflatoxin Production in Aspergillus flavus When Competing with Soil Microbes Could Maintain Balancing Selection

by Milton T. Drott, Tracy Debenport, Steven A. Higgins, Daniel H. Buckley, Michael G. Milgroom
Published 2019-02-01

Millimeter-scale patterns of phylogenetic and trait diversity in a salt marsh microbial mat

by David W. Armitage, Kimberley L. Gallagher, Nicholas D. Youngblut, Daniel H. Buckley, Stephen H. Zinder
Published 2012-08-01

Unearthing the ecology of soil microorganisms using a high resolution DNA-SIP approach to explore cellulose and xylose metabolism in soil

by Charles ePepe-Ranney, Ashley N Campbell, Chantal N Koechli, Sean eBerthrong, Daniel H Buckley
Published 2016-05-01

A Latitudinal Diversity Gradient in Terrestrial Bacteria of the Genus Streptomyces

by Cheryl P. Andam, James R. Doroghazi, Ashley N. Campbell, Peter J. Kelly, Mallory J. Choudoir, Daniel H. Buckley
Published 2016-04-01

The Green Berry Consortia of the Sippewissett Salt Marsh: Millimeter-Sized Aggregates of Diazotrophic Unicellular Cyanobacteria

by Elizabeth G. Wilbanks, Verena Salman-Carvalho, Ulrike Jaekel, Parris T. Humphrey, Jonathan A. Eisen, Daniel H. Buckley, Stephen H. Zinder
Published 2017-09-01

Evaluating the Microbiome of Hemp

by Samuel E. Barnett, Ali R. Cala, Julie L. Hansen, Jamie Crawford, Donald R. Viands, Lawrence B. Smart, Christine D. Smart, Daniel H. Buckley
Published 2020-10-01