The distribution of antibiotic resistance genes in chicken gut microbiota commensals

by Helena Juricova, Jitka Matiasovicova, Tereza Kubasova, Darina Cejkova, Ivan Rychlik
Published 2021-02-01

A Retrospective Study on Genetic Heterogeneity within Treponema Strains: Subpopulations Are Genetically Distinct in a Limited Number of Positions.

by Darina Čejková, Michal Strouhal, Steven J Norris, George M Weinstock, David Šmajs
Published 2015-01-01

Genomic analysis of Escherichia coli strains isolated from diseased chicken in the Czech Republic

by Aneta Papouskova, Martina Masarikova, Adam Valcek, David Senk, Darina Cejkova, Eva Jahodarova, Alois Cizek
Published 2020-06-01

Whole genome sequencing and function prediction of 133 gut anaerobes isolated from chicken caecum in pure cultures

by Matej Medvecky, Darina Cejkova, Ondrej Polansky, Daniela Karasova, Tereza Kubasova, Alois Cizek, Ivan Rychlik
Published 2018-07-01

Whole genome sequence of the Treponema pallidum subsp. endemicum strain Iraq B: A subpopulation of bejel treponemes contains full-length tprF and tprG genes similar to those presen...

by Lenka Mikalová, Klára Janečková, Markéta Nováková, Michal Strouhal, Darina Čejková, Kristin N Harper, David Šmajs
Published 2020-01-01

Complete genome sequences of two strains of Treponema pallidum subsp. pertenue from Ghana, Africa: Identical genome sequences in samples isolated more than 7 years apart.

by Michal Strouhal, Lenka Mikalová, Pavla Havlíčková, Paolo Tenti, Darina Čejková, Ivan Rychlík, Sylvia Bruisten, David Šmajs
Published 2017-09-01

Succession and replacement of bacterial populations in the caecum of egg laying hens over their whole life.

by Petra Videnska, Karel Sedlar, Maja Lukac, Marcela Faldynova, Lenka Gerzova, Darina Cejkova, Frantisek Sisak, Ivan Rychlik
Published 2014-01-01

Effects of host genetics and environmental conditions on fecal microbiota composition of pigs.

by Tereza Kubasova, Lenka Davidova-Gerzova, Vladimir Babak, Darina Cejkova, Lucile Montagne, Nathalie Le-Floc'h, Ivan Rychlik
Published 2018-01-01

Complete genome sequences of two strains of Treponema pallidum subsp. pertenue from Indonesia: Modular structure of several treponemal genes.

by Michal Strouhal, Lenka Mikalová, Jan Haviernik, Sascha Knauf, Sylvia Bruisten, Gerda T Noordhoek, Jan Oppelt, Darina Čejková, David Šmajs
Published 2018-10-01

Resequencing of Treponema pallidum ssp. pallidum strains Nichols and SS14: correction of sequencing errors resulted in increased separation of syphilis treponeme subclusters.

by Helena Pětrošová, Petra Pospíšilová, Michal Strouhal, Darina Čejková, Marie Zobaníková, Lenka Mikalová, Erica Sodergren, George M Weinstock, David Šmajs
Published 2013-01-01

Genome analysis of Treponema pallidum subsp. pallidum and subsp. pertenue strains: most of the genetic differences are localized in six regions.

by Lenka Mikalová, Michal Strouhal, Darina Čejková, Marie Zobaníková, Petra Pospíšilová, Steven J Norris, Erica Sodergren, George M Weinstock, David Šmajs
Published 2010-12-01

Contact with adult hen affects development of caecal microbiota in newly hatched chicks.

by Tereza Kubasova, Miloslava Kollarcikova, Magdalena Crhanova, Daniela Karasova, Darina Cejkova, Alena Sebkova, Jitka Matiasovicova, Marcela Faldynova, Alexandra Pokorna, Alois Cizek, Ivan Rychlik
Published 2019-01-01

Whole genome sequence of the Treponema Fribourg-Blanc: unspecified simian isolate is highly similar to the yaws subspecies.

by Marie Zobaníková, Michal Strouhal, Lenka Mikalová, Darina Cejková, Lenka Ambrožová, Petra Pospíšilová, Lucinda L Fulton, Lei Chen, Erica Sodergren, George M Weinstock, David Smajs
Published 2013-01-01

Whole genome sequence of Treponema pallidum ssp. pallidum, strain Mexico A, suggests recombination between yaws and syphilis strains.

by Helena Pětrošová, Marie Zobaníková, Darina Čejková, Lenka Mikalová, Petra Pospíšilová, Michal Strouhal, Lei Chen, Xiang Qin, Donna M Muzny, George M Weinstock, David Šmajs
Published 2012-01-01

Gut Anaerobes Capable of Chicken Caecum Colonisation

by Tereza Kubasova, Miloslava Kollarcikova, Magdalena Crhanova, Daniela Karasova, Darina Cejkova, Alena Sebkova, Jitka Matiasovicova, Marcela Faldynova, Frantisek Sisak, Vladimir Babak, Alexandra Pokorna, Alois Cizek, Ivan Rychlik
Published 2019-11-01

Sequencing of Treponema pallidum subsp. pallidum from isolate UZ1974 using Anti-Treponemal Antibodies Enrichment: First complete whole genome sequence obtained directly from human...

by Linda Grillová, Lorenzo Giacani, Lenka Mikalová, Michal Strouhal, Radim Strnadel, Christina Marra, Arturo Centurion-Lara, Lucy Poveda, Giancarlo Russo, Darina Čejková, Vladimír Vašků, Jan Oppelt, David Šmajs
Published 2018-01-01

Characterization of Antibiotic Resistance Gene Abundance and Microbiota Composition in Feces of Organic and Conventional Pigs from Four EU Countries.

by Lenka Gerzova, Vladimir Babak, Karel Sedlar, Marcela Faldynova, Petra Videnska, Darina Cejkova, Annette Nygaard Jensen, Martine Denis, Annaelle Kerouanton, Antonia Ricci, Veronica Cibin, Julia Österberg, Ivan Rychlik
Published 2015-01-01

Whole genome sequence of the Treponema pallidum subsp. endemicum strain Bosnia A: the genome is related to yaws treponemes but contains few loci similar to syphilis treponemes.

by Barbora Staudová, Michal Strouhal, Marie Zobaníková, Darina Cejková, Lucinda L Fulton, Lei Chen, Lorenzo Giacani, Arturo Centurion-Lara, Sylvia M Bruisten, Erica Sodergren, George M Weinstock, David Smajs
Published 2014-01-01

Characterization of egg laying hen and broiler fecal microbiota in poultry farms in Croatia, Czech Republic, Hungary and Slovenia.

by Petra Videnska, Md Masudur Rahman, Marcela Faldynova, Vladimir Babak, Marta Elsheimer Matulova, Estella Prukner-Radovcic, Ivan Krizek, Sonja Smole-Mozina, Jasna Kovac, Ama Szmolka, Bela Nagy, Karel Sedlar, Darina Cejkova, Ivan Rychlik
Published 2014-01-01

Whole genome sequences of three Treponema pallidum ssp. pertenue strains: yaws and syphilis treponemes differ in less than 0.2% of the genome sequence.

by Darina Cejková, Marie Zobaníková, Lei Chen, Petra Pospíšilová, Michal Strouhal, Xiang Qin, Lenka Mikalová, Steven J Norris, Donna M Muzny, Richard A Gibbs, Lucinda L Fulton, Erica Sodergren, George M Weinstock, David Smajs
Published 2012-01-01