Solving the influence maximization problem reveals regulatory organization of the yeast cell cycle.

by David L Gibbs, Ilya Shmulevich
Published 2017-06-01

Flexibility of Boolean Network Reservoir Computers in Approximating Arbitrary Recursive and Non-Recursive Binary Filters

by Moriah Echlin, Boris Aguilar, Max Notarangelo, David L. Gibbs, Ilya Shmulevich
Published 2018-12-01

Multi-omic network signatures of disease

by David L Gibbs, Lisa E Gralinski, Ralph S Baric, Shannon K McWeeney
Published 2014-01-01

Patient-Specific Cell Communication Networks Associate With Disease Progression in Cancer

by David L. Gibbs, Boris Aguilar, Vésteinn Thorsson, Alexander V. Ratushny, Ilya Shmulevich
Published 2021-08-01

Intrinsic Genetic and Transcriptomic Patterns Reflect Tumor Immune Subtypes Facilitating Exploring Possible Combinatory Therapy

by Yong Xu, Yong Xu, Daixi Li, Zhenhao Liu, David L. Gibbs, Lu Xie, Guangrong Qin, Guangrong Qin
Published 2020-04-01

A Pan-Cancer Approach to Predict Responsiveness to Immune Checkpoint Inhibitors by Machine Learning

by Maurizio Polano, Marco Chierici, Michele Dal Bo, Davide Gentilini, Federica Di Cintio, Lorena Baboci, David L. Gibbs, Cesare Furlanello, Giuseppe Toffoli
Published 2019-10-01

ADAPTS: Automated deconvolution augmentation of profiles for tissue specific cells.

by Samuel A Danziger, David L Gibbs, Ilya Shmulevich, Mark McConnell, Matthew W B Trotter, Frank Schmitz, David J Reiss, Alexander V Ratushny
Published 2019-01-01

CRI iAtlas: an interactive portal for immuno-oncology research [version 1; peer review: 2 approved]

by James A. Eddy, Vésteinn Thorsson, Andrew E. Lamb, David L. Gibbs, Carolina Heimann, Jia Xin Yu, Verena Chung, Yooree Chae, Kristen Dang, Benjamin G. Vincent, Ilya Shmulevich, Justin Guinney
Published 2020-08-01

Using incomplete trios to boost confidence in family based association studies

by Varsha eDhankani, David L Gibbs, Theo eKnijnenburg, Roger eKramer, Joseph eVockley, Joseph eVockley, John eNiederhuber, John eNiederhuber, Ilya eShmulevich, Brady eBernard
Published 2016-03-01