Benchmarking common quantification strategies for large-scale phosphoproteomics

by Alexander Hogrebe, Louise von Stechow, Dorte B. Bekker-Jensen, Brian T. Weinert, Christian D. Kelstrup, Jesper V. Olsen
Published 2018-03-01

Proteomic investigation of Cbl and Cbl-b in neuroblastoma cell differentiation highlights roles for SHP-2 and CDK16

by Anna-Kathrine Pedersen, Anamarija Pfeiffer, Gopal Karemore, Vyacheslav Akimov, Dorte B. Bekker-Jensen, Blagoy Blagoev, Chiara Francavilla, Jesper V. Olsen
Published 2021-04-01

Regulation of the Golgi Apparatus by p38 and JNK Kinases during Cellular Stress Responses

by Cathrine Nordgaard, Maxim A. X. Tollenaere, Ana Martinez Del Val, Dorte B. Bekker-Jensen, Melanie Blasius, Jesper V. Olsen, Simon Bekker-Jensen
Published 2021-09-01

Rapid and site-specific deep phosphoproteome profiling by data-independent acquisition without the need for spectral libraries

by Dorte B. Bekker-Jensen, Oliver M. Bernhardt, Alexander Hogrebe, Ana Martinez-Val, Lynn Verbeke, Tejas Gandhi, Christian D. Kelstrup, Lukas Reiter, Jesper V. Olsen
Published 2020-02-01

Proteomic Analysis of Lysine Acetylation Sites in Rat Tissues Reveals Organ Specificity and Subcellular Patterns

by Alicia Lundby, Kasper Lage, Brian T. Weinert, Dorte B. Bekker-Jensen, Anna Secher, Tine Skovgaard, Christian D. Kelstrup, Anatoliy Dmytriyev, Chunaram Choudhary, Carsten Lundby, Jesper V. Olsen
Published 2012-08-01

Causal integration of multi‐omics data with prior knowledge to generate mechanistic hypotheses

by Aurelien Dugourd, Christoph Kuppe, Marco Sciacovelli, Enio Gjerga, Attila Gabor, Kristina B. Emdal, Vitor Vieira, Dorte B. Bekker‐Jensen, Jennifer Kranz, Eric.M.J. Bindels, Ana S.H. Costa, Abel Sousa, Pedro Beltrao, Miguel Rocha, Jesper V. Olsen, Christian Frezza, Rafael Kramann, Julio Saez‐Rodriguez
Published 2021-01-01