Variation in siderophore biosynthetic gene distribution and production across environmental and faecal populations of Escherichia coli.

by Laura J Searle, Guillaume Méric, Ida Porcelli, Samuel K Sheppard, Sacha Lucchini
Published 2015-01-01

A reference pan-genome approach to comparative bacterial genomics: identification of novel epidemiological markers in pathogenic Campylobacter.

by Guillaume Méric, Koji Yahara, Leonardos Mageiros, Ben Pascoe, Martin C J Maiden, Keith A Jolley, Samuel K Sheppard
Published 2014-01-01

Trycycler: consensus long-read assemblies for bacterial genomes

by Ryan R. Wick, Louise M. Judd, Louise T. Cerdeira, Jane Hawkey, Guillaume Méric, Ben Vezina, Kelly L. Wyres, Kathryn E. Holt
Published 2021-09-01

Distinct Phenotypic and Genomic Signatures Underlie Contrasting Pathogenic Potential of Staphylococcus epidermidis Clonal Lineages

by Diana Espadinha, Diana Espadinha, Rita G. Sobral, Catarina Inês Mendes, Guillaume Méric, Samuel K. Sheppard, Samuel K. Sheppard, João A. Carriço, Hermínia de Lencastre, Hermínia de Lencastre, Maria Miragaia
Published 2019-08-01

Genome Comparison of Erythromycin Resistant Campylobacter from Turkeys Identifies Hosts and Pathways for Horizontal Spread of erm(B) Genes

by Diego Florez-Cuadrado, María Ugarte-Ruiz, Guillaume Meric, Alberto Quesada, M. C. Porrero, Ben Pascoe, Jose L. Sáez-Llorente, Gema L. Orozco, Lucas Domínguez, Lucas Domínguez, Samuel K. Sheppard
Published 2017-11-01

The Potential of Isolation Source to Predict Colonization in Avian Hosts: A Case Study in Campylobacter jejuni Strains From Three Bird Species

by Clara Atterby, Evangelos Mourkas, Evangelos Mourkas, Guillaume Méric, Ben Pascoe, Ben Pascoe, Helen Wang, Jonas Waldenström, Samuel K. Sheppard, Samuel K. Sheppard, Björn Olsen, Josef D. Järhult, Patrik Ellström
Published 2018-03-01

Links between gut microbiome composition and fatty liver disease in a large population sample

by Matti O. Ruuskanen, Fredrik Åberg, Ville Männistö, Aki S. Havulinna, Guillaume Méric, Yang Liu, Rohit Loomba, Yoshiki Vázquez-Baeza, Anupriya Tripathi, Liisa M. Valsta, Michael Inouye, Pekka Jousilahti, Veikko Salomaa, Mohit Jain, Rob Knight, Leo Lahti, Teemu J. Niiranen
Published 2021-01-01

A GWAS on Helicobacter pylori strains points to genetic variants associated with gastric cancer risk

by Elvire Berthenet, Koji Yahara, Kaisa Thorell, Ben Pascoe, Guillaume Meric, Jane M. Mikhail, Lars Engstrand, Helena Enroth, Alain Burette, Francis Megraud, Christine Varon, John C Atherton, Sinead Smith, Thomas S. Wilkinson, Matthew D. Hitchings, Daniel Falush, Samuel K. Sheppard
Published 2018-08-01

Genomic epidemiology of Campylobacter jejuni associated with asymptomatic pediatric infection in the Peruvian Amazon.

by Ben Pascoe, Francesca Schiaffino, Susan Murray, Guillaume Méric, Sion C Bayliss, Matthew D Hitchings, Evangelos Mourkas, Jessica K Calland, Rosa Burga, Pablo Peñataro Yori, Keith A Jolley, Kerry K Cooper, Craig T Parker, Maribel Paredes Olortegui, Margaret N Kosek, Samuel K Sheppard
Published 2020-08-01

Epistasis analysis uncovers hidden antibiotic resistance-associated fitness costs hampering the evolution of MRSA

by Maho Yokoyama, Emily Stevens, Maisem Laabei, Leann Bacon, Kate Heesom, Sion Bayliss, Nicola Ooi, Alex J. O’Neill, Ewan Murray, Paul Williams, Anneke Lubben, Shaun Reeksting, Guillaume Meric, Ben Pascoe, Samuel K. Sheppard, Mario Recker, Laurence D. Hurst, Ruth C. Massey
Published 2018-07-01

Correction: Biofilm Morphotypes and Population Structure among Staphylococcus epidermidis from Commensal and Clinical Samples.

by Llinos G Harris, Susan Murray, Ben Pascoe, James Bray, Guillaume Meric, Leonardos Mageiros, Thomas S Wilkinson, Rose Jeeves, Holger Rohde, Stefan Schwarz, Herminia de Lencastre, Maria Miragaia, Joana Rolo, Rory Bowden, Keith A Jolley, Martin C J Maiden, Dietrich Mack, Samuel K Sheppard
Published 2016-01-01

Biofilm Morphotypes and Population Structure among Staphylococcus epidermidis from Commensal and Clinical Samples.

by Llinos G Harris, Susan Murray, Ben Pascoe, James Bray, Guillaume Meric, Leonardos Mageiros, Thomas S Wilkinson, Rose Jeeves, Holger Rohde, Stefan Schwarz, Herminia de Lencastre, Maria Miragaia, Joana Rolo, Rory Bowden, Keith A Jolley, Martin C J Maiden, Dietrich Mack, Samuel K Sheppard
Published 2016-01-01

Genome evolution and the emergence of pathogenicity in avian Escherichia coli

by Leonardos Mageiros, Guillaume Méric, Sion C. Bayliss, Johan Pensar, Ben Pascoe, Evangelos Mourkas, Jessica K. Calland, Koji Yahara, Susan Murray, Thomas S. Wilkinson, Lisa K. Williams, Matthew D. Hitchings, Jonathan Porter, Kirsty Kemmett, Edward J. Feil, Keith A. Jolley, Nicola J. Williams, Jukka Corander, Samuel K. Sheppard
Published 2021-02-01

Author Correction: Genome evolution and the emergence of pathogenicity in avian Escherichia coli

by Leonardos Mageiros, Guillaume Méric, Sion C. Bayliss, Johan Pensar, Ben Pascoe, Evangelos Mourkas, Jessica K. Calland, Koji Yahara, Susan Murray, Thomas S. Wilkinson, Lisa K. Williams, Matthew D. Hitchings, Jonathan Porter, Kirsty Kemmett, Edward J. Feil, Keith A. Jolley, Nicola J. Williams, Jukka Corander, Samuel K. Sheppard
Published 2021-03-01

Taxonomic signatures of cause-specific mortality risk in human gut microbiome

by Aaro Salosensaari, Ville Laitinen, Aki S. Havulinna, Guillaume Meric, Susan Cheng, Markus Perola, Liisa Valsta, Georg Alfthan, Michael Inouye, Jeramie D. Watrous, Tao Long, Rodolfo A. Salido, Karenina Sanders, Caitriona Brennan, Gregory C. Humphrey, Jon G. Sanders, Mohit Jain, Pekka Jousilahti, Veikko Salomaa, Rob Knight, Leo Lahti, Teemu Niiranen
Published 2021-05-01

Disease-associated genotypes of the commensal skin bacterium Staphylococcus epidermidis

by Guillaume Méric, Leonardos Mageiros, Johan Pensar, Maisem Laabei, Koji Yahara, Ben Pascoe, Nattinee Kittiwan, Phacharaporn Tadee, Virginia Post, Sarah Lamble, Rory Bowden, James E. Bray, Mario Morgenstern, Keith A. Jolley, Martin C. J. Maiden, Edward J. Feil, Xavier Didelot, Maria Miragaia, Herminia de Lencastre, T. Fintan Moriarty, Holger Rohde, Ruth Massey, Dietrich Mack, Jukka Corander, Samuel K. Sheppard
Published 2018-11-01