Identifying stably expressed genes from multiple RNA-Seq data sets

by Bin Zhuo, Sarah Emerson, Jeff H. Chang, Yanming Di
Published 2016-12-01

Novel mechanism of metabolic co-regulation coordinates the biosynthesis of secondary metabolites in Pseudomonas protegens

by Qing Yan, Benjamin Philmus, Jeff H Chang, Joyce E Loper
Published 2017-03-01

RNA-Seq for Plant Pathogenic Bacteria

by Jeffrey A. Kimbrel, Yanming Di, Jason S. Cumbie, Jeff H. Chang
Published 2011-10-01

Phytopathogenic Rhodococcus Have Diverse Plasmids With Few Conserved Virulence Functions

by Elizabeth A. Savory, Alexandra J. Weisberg, Danielle M. Stevens, Allison L. Creason, Skylar L. Fuller, Emma M. Pearce, Jeff H. Chang, Jeff H. Chang
Published 2020-05-01

Length bias correction in gene ontology enrichment analysis using logistic regression.

by Gu Mi, Yanming Di, Sarah Emerson, Jason S Cumbie, Jeff H Chang
Published 2012-01-01

Re-evaluation of a Tn5::gacA mutant of Pseudomonas syringae pv. tomato DC3000 uncovers roles for uvrC and anmK in promoting virulence.

by Megan R O'Malley, Alexandra J Weisberg, Jeff H Chang, Jeffrey C Anderson
Published 2019-01-01

Lotus japonicus alters in planta fitness of Mesorhizobium loti dependent on symbiotic nitrogen fixation.

by Kenjiro W Quides, Glenna M Stomackin, Hsu-Han Lee, Jeff H Chang, Joel L Sachs
Published 2017-01-01

Use of whole genome sequences to develop a molecular phylogenetic framework for Rhodococcus fascians and the Rhodococcus genus

by Allison L. Creason, Edward W. Davis, Melodie L. Putnam, Olivier M. Vandeputte, Jeff H Chang
Published 2014-08-01

Differential Suppression of Nicotiana benthamiana Innate Immune Responses by Transiently Expressed Pseudomonas syringae Type III Effectors

by Selena Gimenez-Ibanez, Selena Gimenez-Ibanez, Dagmar R. Hann, Dagmar R. Hann, Dagmar R. Hann, Jeff H. Chang, Jeff H. Chang, Cécile Segonzac, Cécile Segonzac, Thomas Boller, John P. Rathjen, John P. Rathjen
Published 2018-05-01

The plant actin cytoskeleton responds to signals from microbe-associated molecular patterns.

by Jessica L Henty-Ridilla, Masaki Shimono, Jiejie Li, Jeff H Chang, Brad Day, Christopher J Staiger
Published 2013-01-01

Gall-ID: tools for genotyping gall-causing phytopathogenic bacteria

by Edward W. Davis II, Alexandra J. Weisberg, Javier F. Tabima, Niklaus J. Grunwald, Jeff H. Chang
Published 2016-07-01

Response to comments on “Evolutionary transitions between beneficial and phytopathogenic Rhodococcus challenge disease management”

by Jeff H Chang, Melodie L Putnam, Niklaus J Grünwald, Elizabeth A Savory, Skylar L Fuller, Alexandra J Weisberg
Published 2018-05-01

Mathematical modeling of a real‐time isothermal amplification assay for Erwinia amylovora

by Michael I. Gordon, David P. Klemer, Skylar L. Fuller, Jeff H. Chang, Daniel R. Klemer, Melodie L. Putnam
Published 2019-10-01

A Novel Species-Level Group of Streptomyces Exhibits Variation in Phytopathogenicity Despite Conservation of Virulence Loci

by Alexandra J. Weisberg, Charles G. Kramer, Raghavendhar R. Kotha, Devanand L. Luthria, Jeff H. Chang, Christopher R. Clarke
Published 2021-01-01

Antibacterial Potential of Secondary Metabolites from Indonesian Marine Bacterial Symbionts

by Risa Nofiani, Alexandra J. Weisberg, Takeshi Tsunoda, Ruqiah Ganda Putri Panjaitan, Ridho Brilliantoro, Jeff H. Chang, Benjamin Philmus, Taifo Mahmud
Published 2020-01-01

Mutualistic co-evolution of type III effector genes in Sinorhizobium fredii and Bradyrhizobium japonicum.

by Jeffrey A Kimbrel, William J Thomas, Yuan Jiang, Allison L Creason, Caitlin A Thireault, Joel L Sachs, Jeff H Chang
Published 2013-02-01

The rare codon AGA is involved in regulation of pyoluteorin biosynthesis in Pseudomonas protegens Pf-5

by Qing eYan, Benjamin ePhilmus, Cedar eHesse, Max eKohen, Jeff H Chang, Joyce eLoper, Joyce eLoper
Published 2016-04-01

The Identification and Conservation of Tunicaminyluracil-Related Biosynthetic Gene Clusters in Several Rathayibacter Species Collected From Australia, Africa, Eurasia, and North Am...

by Matthew A. Tancos, Aaron J. Sechler, Edward W. Davis, Jeff H. Chang, Brenda K. Schroeder, Timothy D. Murray, Elizabeth E. Rogers
Published 2020-01-01

Dynamic evolution of pathogenicity revealed by sequencing and comparative genomics of 19 Pseudomonas syringae isolates.

by David A Baltrus, Marc T Nishimura, Artur Romanchuk, Jeff H Chang, M Shahid Mukhtar, Karen Cherkis, Jeff Roach, Sarah R Grant, Corbin D Jones, Jeffery L Dangl
Published 2011-07-01

Genomic and metabolic differences between Pseudomonas putida populations inhabiting sugarcane rhizosphere or bulk soil.

by Lucas Dantas Lopes, Alexandra J Weisberg, Edward W Davis, Camila de S Varize, Michele de C Pereira E Silva, Jeff H Chang, Joyce E Loper, Fernando D Andreote
Published 2019-01-01