Fast segmentation of stained nuclei in terabyte-scale, time resolved 3D microscopy image stacks.

by Johannes Stegmaier, Jens C Otte, Andrei Kobitski, Andreas Bartschat, Ariel Garcia, G Ulrich Nienhaus, Uwe Strähle, Ralf Mikut
Published 2014-01-01

Impacts of different exposure scenarios on transcript abundances in Danio rerio embryos when investigating the toxicological burden of riverine sediments.

by Kerstin Bluhm, Jens C Otte, Lixin Yang, Christian Zinsmeister, Jessica Legradi, Steffen Keiter, Thomas Kosmehl, Thomas Braunbeck, Uwe Strähle, Henner Hollert
Published 2014-01-01

EmbryoMiner: A new framework for interactive knowledge discovery in large-scale cell tracking data of developing embryos.

by Benjamin Schott, Manuel Traub, Cornelia Schlagenhauf, Masanari Takamiya, Thomas Antritter, Andreas Bartschat, Katharina Löffler, Denis Blessing, Jens C Otte, Andrei Y Kobitski, G Ulrich Nienhaus, Uwe Strähle, Ralf Mikut, Johannes Stegmaier
Published 2018-04-01

Contribution of priority PAHs and POPs to Ah receptor-mediated activities in sediment samples from the River Elbe Estuary, Germany.

by Jens C Otte, Steffen Keiter, Christopher Faßbender, Eric B Higley, Paula Suares Rocha, Markus Brinkmann, Dierk-Steffen Wahrendorf, Werner Manz, Markus A Wetzel, Thomas Braunbeck, John P Giesy, Markus Hecker, Henner Hollert
Published 2013-01-01

Pax6 organizes the anterior eye segment by guiding two distinct neural crest waves.

by Masanari Takamiya, Johannes Stegmaier, Andrei Yu Kobitski, Benjamin Schott, Benjamin D Weger, Dimitra Margariti, Angel R Cereceda Delgado, Victor Gourain, Tim Scherr, Lixin Yang, Sebastian Sorge, Jens C Otte, Volker Hartmann, Jos van Wezel, Rainer Stotzka, Thomas Reinhard, Günther Schlunck, Thomas Dickmeis, Sepand Rastegar, Ralf Mikut, Gerd Ulrich Nienhaus, Uwe Strähle
Published 2020-06-01