Correction for Morton et al., “Uncovering the Horseshoe Effect in Microbial Analyses”

by James T. Morton, Liam Toran, Anna Edlund, Jessica L. Metcalf, Christian Lauber, Rob Knight
Published 2018-02-01

Uncovering the Horseshoe Effect in Microbial Analyses

by James T. Morton, Liam Toran, Anna Edlund, Jessica L. Metcalf, Christian Lauber, Rob Knight, Janet K. Jansson
Published 2017-02-01

Microbiome Data Accurately Predicts the Postmortem Interval Using Random Forest Regression Models

by Aeriel Belk, Zhenjiang Zech Xu, David O. Carter, Aaron Lynne, Sibyl Bucheli, Rob Knight, Jessica L. Metcalf
Published 2018-02-01

Preservation Methods Differ in Fecal Microbiome Stability, Affecting Suitability for Field Studies

by Se Jin Song, Amnon Amir, Jessica L. Metcalf, Katherine R. Amato, Zhenjiang Zech Xu, Greg Humphrey, Rob Knight, M. Denise Dearing
Published 2016-05-01

Ground beef microbiome changes with antimicrobial decontamination interventions and product storage.

by Margaret D Weinroth, Brianna C Britton, Kathryn R McCullough, Jennifer N Martin, Ifigenia Geornaras, Rob Knight, Keith E Belk, Jessica L Metcalf
Published 2019-01-01

A Pilot Study of Microbial Succession in Human Rib Skeletal Remains during Terrestrial Decomposition

by Heather Deel, Alexandra L. Emmons, Jennifer Kiely, Franklin E. Damann, David O. Carter, Aaron Lynne, Rob Knight, Zhenjiang Zech Xu, Sibyl Bucheli, Jessica L. Metcalf
Published 2021-08-01

Air versus Water Chilling of Chicken: a Pilot Study of Quality, Shelf-Life, Microbial Ecology, and Economics

by Aeriel D. Belk, Toni Duarte, Casey Quinn, David A. Coil, Keith E. Belk, Jonathan A. Eisen, Jason C. Quinn, Jennifer N. Martin, Xiang Yang, Jessica L. Metcalf
Published 2021-04-01

Plant Selenium Hyperaccumulation Affects Rhizosphere: Enhanced Species Richness and Altered Species Composition

by Alyssa T. Cochran, Jemma Bauer, Jessica L. Metcalf, Petra Lovecka, Martina Sura de Jong, Sven Warris, Paul J. W. Mooijman, Ingrid van der Meer, Rob Knight, Elizabeth A. H. Pilon-Smits
Published 2018-06-01

Using the gut microbiota as a novel tool for examining colobine primate GI health

by Katherine R. Amato, Jessica L. Metcalf, Se Jin Song, Vanessa L. Hale, Jonathan Clayton, Gail Ackermann, Greg Humphrey, Kefeng Niu, Duoying Cui, Hongxia Zhao, Mark D. Schrenzel, Chia L. Tan, Rob Knight, Josephine Braun
Published 2016-07-01

Convergence of human and Old World monkey gut microbiomes demonstrates the importance of human ecology over phylogeny

by Katherine R. Amato, Elizabeth K. Mallott, Daniel McDonald, Nathaniel J. Dominy, Tony Goldberg, Joanna E. Lambert, Larissa Swedell, Jessica L. Metcalf, Andres Gomez, Gillian A. O. Britton, Rebecca M. Stumpf, Steven R. Leigh, Rob Knight
Published 2019-10-01

Balance Trees Reveal Microbial Niche Differentiation

by James T. Morton, Jon Sanders, Robert A. Quinn, Daniel McDonald, Antonio Gonzalez, Yoshiki Vázquez-Baeza, Jose A. Navas-Molina, Se Jin Song, Jessica L. Metcalf, Embriette R. Hyde, Manuel Lladser, Pieter C. Dorrestein, Rob Knight, Janet K. Jansson
Published 2017-01-01

A microbial clock provides an accurate estimate of the postmortem interval in a mouse model system

by Jessica L Metcalf, Laura Wegener Parfrey, Antonio Gonzalez, Christian L Lauber, Dan Knights, Gail Ackermann, Gregory C Humphrey, Matthew J Gebert, Will Van Treuren, Donna Berg-Lyons, Kyle Keepers, Yan Guo, James Bullard, Noah Fierer, David O Carter, Rob Knight
Published 2013-10-01

Experiences and lessons learned from two virtual, hands-on microbiome bioinformatics workshops.

by Matthew R Dillon, Evan Bolyen, Anja Adamov, Aeriel Belk, Emily Borsom, Zachary Burcham, Justine W Debelius, Heather Deel, Alex Emmons, Mehrbod Estaki, Chloe Herman, Christopher R Keefe, Jamie T Morton, Renato R M Oliveira, Andrew Sanchez, Anthony Simard, Yoshiki Vázquez-Baeza, Michal Ziemski, Hazuki E Miwa, Terry A Kerere, Carline Coote, Richard Bonneau, Rob Knight, Guilherme Oliveira, Piraveen Gopalasingam, Benjamin D Kaehler, Emily K Cope, Jessica L Metcalf, Michael S Robeson Ii, Nicholas A Bokulich, J Gregory Caporaso
Published 2021-06-01

American Gut: an Open Platform for Citizen Science Microbiome Research

by Daniel McDonald, Embriette Hyde, Justine W. Debelius, James T. Morton, Antonio Gonzalez, Gail Ackermann, Alexander A. Aksenov, Bahar Behsaz, Caitriona Brennan, Yingfeng Chen, Lindsay DeRight Goldasich, Pieter C. Dorrestein, Robert R. Dunn, Ashkaan K. Fahimipour, James Gaffney, Jack A. Gilbert, Grant Gogul, Jessica L. Green, Philip Hugenholtz, Greg Humphrey, Curtis Huttenhower, Matthew A. Jackson, Stefan Janssen, Dilip V. Jeste, Lingjing Jiang, Scott T. Kelley, Dan Knights, Tomasz Kosciolek, Joshua Ladau, Jeff Leach, Clarisse Marotz, Dmitry Meleshko, Alexey V. Melnik, Jessica L. Metcalf, Hosein Mohimani, Emmanuel Montassier, Jose Navas-Molina, Tanya T. Nguyen, Shyamal Peddada, Pavel Pevzner, Katherine S. Pollard, Gholamali Rahnavard, Adam Robbins-Pianka, Naseer Sangwan, Joshua Shorenstein, Larry Smarr, Se Jin Song, Timothy Spector, Austin D. Swafford, Varykina G. Thackray, Luke R. Thompson, Anupriya Tripathi, Yoshiki Vázquez-Baeza, Alison Vrbanac, Paul Wischmeyer, Elaine Wolfe, Qiyun Zhu, The American Gut Consortium, Rob Knight
Published 2018-05-01